RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 IFFO1Q0D2I5 559 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 NFATC2Q13469 925 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 PEX6Q13608 980 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 PTPRCAPQ14761 206 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 LRRC14Q15048 493 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 UAP1Q16222 522 aaPredicted RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 ZNF528Q3MIS6 628 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 HSP90AA5PQ58FG0 334 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 ZRANB3Q5FWF4 1079 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 FAM151BQ6UXP7 276 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 MARK2Q7KZI7 788 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 TAOK1Q7L7X3 1001 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 LRRC6Q86X45 466 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 FAM174AQ8TBP5 190 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 ZNF398Q8TD17 642 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 VPS35Q96QK1 796 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 CPNE1Q99829 537 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 TRIM56Q9BRZ2 755 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 RIOK2Q9BVS4 552 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 ASB8Q9H765 288 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 IARS2Q9NSE4 1012 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 INTS10Q9NVR2 710 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 VPS18Q9P253 973 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 SLC24A2Q9UI40 661 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 RABGEF1Q9UJ41 708 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 CRLS1Q9UJA2 301 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 ZFR2Q9UPR6 939 aaKnown RBP13.18□□□□□ -0.3
SNX12-205ENST00000490561 IKBKGQ9Y6K9 419 aa13.18□□□□□ -0.3
SNX12-205ENST00000490561 TRBV5-4A0A0C4DH59 114 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 F8W8V4 182 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 TOR1BO14657 336 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 LATO43561 262 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 TCEA3O75764 348 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 ERVK-10P10266 1014 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 TDGF1P13385 188 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 PMLP29590 882 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 AVPR2P30518 371 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 AKT2P31751 481 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 FOXN2P32314 431 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 GPR1P46091 355 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 CSE1LP55060 971 aaKnown RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 CSTF1Q05048 431 aaKnown RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 ITIH4Q14624 930 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 CASP8Q14790 479 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 SEL1L3Q68CR1 1132 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 TRMT10BQ6PF06 316 aaKnown RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 ADAMTSL4Q6UY14 1074 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 CTAGE3PQ8IX95 158 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 C2CD4AQ8NCU7 369 aaPredicted RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 FOXJ1Q92949 421 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 RUFY1Q96T51 708 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 GPR174Q9BXC1 333 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 SUDS3Q9H7L9 328 aaPredicted RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 CORO1CQ9ULV4 474 aaPredicted RBP13.17□□□□□ -0.3
SNX12-205ENST00000490561 COQ6Q9Y2Z9 468 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 MYLKQ15746 1914 aa13.17□□□□□ -0.3
SNX12-205ENST00000490561 AGAP14A8MT82 685 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PRR33A8MZF0 331 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 CFAP99D6REC4 459 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 CCL22O00626 93 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 GAPDHSO14556 408 aaPredicted RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 MAP3K13O43283 966 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 ATP8B1O43520 1251 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 INHBAP08476 426 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 RALBP11234 206 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 HNRNPA2B1P22626 353 aaKnown RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 CNTFP26441 200 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 CNR2P34972 360 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 GP5P40197 560 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 MSH2P43246 934 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PXNP49023 591 aaPredicted RBP13.16□□□□□ -0.3
SNX12-205ENST00000490561 SERPINB9P50453 376 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PPP2CBP62714 309 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PPP2CAP67775 309 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 RASA2Q15283 850 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 LDLRAP1Q5SW96 308 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 GRTP1Q5TC63 336 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 LGSNQ5TDP6 509 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 RAET1GQ6H3X3 334 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 CILP2Q8IUL8 1156 aa13.16□□□□□ -0.3
SNX12-205ENST00000490561 PHYKPLQ8IUZ5 450 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms