RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 DGKBQ9Y6T7 804 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 PTPRCP08575 1304 aa3.63□□□□□ -1.83
HMGN1-218ENST00000490032 TTC36A6NLP5 189 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 DVL1O14640 695 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 ZNHIT1O43257 154 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 SPINT2O43291 252 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 RNF224P0DH78 156 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 NR1D1P20393 614 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 CNTFP26441 200 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 CPOXP36551 454 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 CCT5P48643 541 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 DVL1P1P54792 670 aaPredicted RBP3.62□□□□□ -1.83
HMGN1-218ENST00000490032 PTP4A2Q12974 167 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 TRPC3Q13507 836 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 FGFBP1Q14512 234 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 DECR1Q16698 335 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 ALG11Q2TAA5 492 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 C14orf177Q52M58 125 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 SIRPB2Q5JXA9 342 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 CTCFLQ8NI51 663 aaPredicted RBP3.62□□□□□ -1.83
HMGN1-218ENST00000490032 TAAR8Q969N4 342 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 ORAI1Q96D31 301 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 LGALS12Q96DT0 336 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 SCRN2Q96FV2 425 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 PPP1R13BQ96KQ4 1090 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 LITAFQ99732 161 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 POLR3CQ9BUI4 534 aaPredicted RBP3.62□□□□□ -1.83
HMGN1-218ENST00000490032 SEBOXQ9HB31 216 aaPredicted RBP3.62□□□□□ -1.83
HMGN1-218ENST00000490032 SARDHQ9UL12 918 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 ACSL5Q9ULC5 683 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 PADI3Q9ULW8 664 aa3.62□□□□□ -1.83
HMGN1-218ENST00000490032 AAR2Q9Y312 384 aaKnown RBP3.62□□□□□ -1.83
HMGN1-218ENST00000490032 ZCWPW2A0A1B0GU75 182 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 VCYO14598 125 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 HOXC11O43248 304 aaPredicted RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TNFSF14O43557 240 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 SEC31AO94979 1220 aaKnown RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 EGFP01133 1207 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 IGHV4-39P01824 125 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 POLBP06746 335 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TUBBP07437 444 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 INHBAP08476 426 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 FAM106CPP0CH98 169 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 ABCD1P33897 745 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 DCTP40126 519 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TAS2R38P59533 333 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TUBB4BP68371 445 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 PMP22Q01453 160 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 GRIK2Q13002 908 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 PPIGQ13427 754 aaKnown RBP eCLIP3.61□□□□□ -1.835e-19■■□□□ 12
HMGN1-218ENST00000490032 GSTA3Q16772 222 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 CCDC96Q2M329 555 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TMEM35AQ53FP2 167 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 SIGIRRQ6IA17 410 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 SLC35E4Q6ICL7 350 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TTI2Q6NXR4 508 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF704Q6ZNC4 412 aaPredicted RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 CACNA2D4Q7Z3S7 1137 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 CNBD1Q8NA66 436 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 CADM4Q8NFZ8 388 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 OR10V1Q8NGI7 309 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TAS1R2Q8TE23 839 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 TMEM47Q9BQJ4 181 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 BARHL1Q9BZE3 327 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 ASAH2Q9NR71 780 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 SLC6A13Q9NSD5 602 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 ACSS1Q9NUB1 689 aaPredicted RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 GGA3Q9NZ52 723 aa3.61□□□□□ -1.83
HMGN1-218ENST00000490032 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 FAF1Q9UNN5 650 aaPredicted RBP3.61□□□□□ -1.83
HMGN1-218ENST00000490032 IGLV5-45A0A087WSX0 123 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 CCDC196A0A1B0GTZ2 297 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 LRRC53A6NM62 1247 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 SYNGR3O43761 229 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 PRKNO60260 465 aaPredicted RBP3.6□□□□□ -1.83
HMGN1-218ENST00000490032 POLR2CP19387 275 aaPredicted RBP3.6□□□□□ -1.83
HMGN1-218ENST00000490032 RUNX1T1Q06455 604 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 DRAP1Q14919 205 aaPredicted RBP3.6□□□□□ -1.83
HMGN1-218ENST00000490032 COL28A1Q2UY09 1125 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 DCST1Q5T197 706 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 ARHGAP11AQ6P4F7 1023 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 FAM171BQ6P995 826 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 SLC27A1Q6PCB7 646 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 DPPA4Q7L190 304 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 DGLUCYQ7Z3D6 616 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 ACVR1CQ8NER5 493 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 HMGCLL1Q8TB92 370 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 HVCN1Q96D96 273 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 KIF1BPQ96EK5 621 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 ST6GAL2Q96JF0 529 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 ACOX2Q99424 681 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 VEZTQ9HBM0 779 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.6□□□□□ -1.83
HMGN1-218ENST00000490032 POLG2Q9UHN1 485 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
HMGN1-218ENST00000490032 F9P00740 461 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 PATE4P0C8F1 98 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 ZNF883P0CG24 379 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms