RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 GLRA4Q5JXX5 417 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 ZNF569Q5MCW4 686 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 TMEM198Q66K66 360 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 DCDC5Q6ZRR9 648 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 Q6ZTC4 211 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 RNF144BQ7Z419 303 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 KIAA2013Q8IYS2 634 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 MMP21Q8N119 569 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 CCAR2Q8N163 923 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 C10orf53Q8N6V4 93 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 LINC01465Q8N7H1 131 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 KDM1BQ8NB78 822 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 C16orf52Q8NHV5 167 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 PSPC1Q8WXF1 523 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 KCNJ9Q92806 393 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 PABPC5Q96DU9 382 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 SAAL1Q96ER3 474 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 MMABQ96EY8 250 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 C16orf45Q96MC5 204 aaPredicted RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 SPATA13Q96N96 652 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 CCDC106Q9BWC9 280 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 C1orf21Q9H246 121 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 GOLPH3LQ9H4A5 285 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 SH2D4AQ9H788 454 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 FBRSL1Q9HCM7 1045 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 PDE11AQ9HCR9 933 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 RRP7BPQ9NSQ0 103 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 MPP6Q9NZW5 540 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 HCN3Q9P1Z3 774 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 CNOT8Q9UFF9 292 aaKnown RBP3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 AP1M2Q9Y6Q5 423 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 ATP7AQ04656 1500 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 PLXNC1O60486 1568 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 ARHGEF5Q12774 1597 aa3.25□□□□□ -1.89
DEPDC1-204ENST00000489862 DHX29Q7Z478 1369 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 PTPN23Q9H3S7 1636 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 DAPK1P53355 1430 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 NCOA1Q15788 1441 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 A2MP01023 1474 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 PTPRMP28827 1452 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CCDC141Q6ZP82 1450 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 BCORL1Q5H9F3 1711 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 AGLP35573 1532 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 IGKV2D-30A0A075B6S6 120 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ARHGEF37A1IGU5 675 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ERICH4A6NGS2 130 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 NDC80O14777 642 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 RIPK2O43353 540 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CA12O43570 354 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 RECQL5O94762 991 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TPPPO94811 219 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 SNX4O95219 450 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ZFYP08048 801 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ABCB1P08183 1280 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CYP19A1P11511 503 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 PRF1P14222 555 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 MCM5P33992 734 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CPOXP36551 454 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CAMLGP49069 296 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CASP9P55211 416 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 EIF3BP55884 814 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TAS2R50P59544 299 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ZNF91Q05481 1191 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 MTA1Q13330 715 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ZNF273Q14593 569 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CRY2Q49AN0 593 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 AASDHQ4L235 1098 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 KCNT1Q5JUK3 1230 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TTC39AQ5SRH9 613 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C10orf25Q5T742 122 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 WDR93Q6P2C0 686 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TMEM81Q6P7N7 255 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C17orf99Q6UX52 265 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 RANBP10Q6VN20 620 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C1orf186Q6ZWK4 172 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CHST3Q7LGC8 479 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 MRPL10Q7Z7H8 261 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 XXYLT1Q8NBI6 393 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 HJURPQ8NCD3 748 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 NEK11Q8NG66 645 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 BICD2Q8TD16 824 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C2CD4CQ8TF44 421 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 ATP6V0A1Q93050 837 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 SYAP1Q96A49 352 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 HS6ST2Q96MM7 605 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 GPR88Q9GZN0 384 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 KCNK9Q9NPC2 374 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 C20orf141Q9NUB4 165 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TMEM184CQ9NVA4 438 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 TAS2R3Q9NYW6 316 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 SEPT10Q9P0V9 454 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CRNNQ9UBG3 495 aaPredicted RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 KLQ9UEF7 1012 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 APPL1Q9UKG1 709 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 DUSP12Q9UNI6 340 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 PIN4Q9Y237 131 aaKnown RBP3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 LIPGQ9Y5X9 500 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 CFAP74Q9C0B2 1584 aa3.24□□□□□ -1.89
DEPDC1-204ENST00000489862 HECW2Q9P2P5 1572 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms