RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	TMEM8B	A6NDV4	472 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SLC4A1	P02730	911 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	PROS1	P07225	676 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	IVL	P07476	585 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	HLA-DPA1	P20036	260 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	GNPDA1	P46926	289 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	CCZ1B	P86790	482 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	CCZ1	P86791	482 aa	Predicted RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	INSM1	Q01101	510 aa	Predicted RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	ILF3	Q12906	894 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	KLF1	Q13351	362 aa	Predicted RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	RPS6KA1	Q15418	735 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SLC1A5	Q15758	541 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SIRPB2	Q5JXA9	342 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	ANKRD20A2	Q5SQ80	823 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	HENMT1	Q5T8I9	393 aa	Known RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SEL1L2	Q5TEA6	688 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	HES3	Q5TGS1	186 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	ANKRD20A1	Q5TYW2	823 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	ANKRD20A3	Q5VUR7	823 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	DOK6	Q6PKX4	331 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	TMC3	Q7Z5M5	1100 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SLC35F3	Q8IY50	421 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SLC25A41	Q8N5S1	370 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	FAM46D	Q8NEK8	389 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	MAPK15	Q8TD08	544 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	NAT6	Q93015	286 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	MRGPRX2	Q96LB1	330 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SPATA13	Q96N96	652 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	GSDMC	Q9BYG8	508 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	TRABD	Q9H4I3	376 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	TRNAU1AP	Q9NX07	287 aa	Known RBP	11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SIRPG	Q9P1W8	387 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	PADI4	Q9UM07	663 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	SUFU	Q9UMX1	484 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	CLCA2	Q9UQC9	943 aa		11.03	□□□□□ -0.64
GGA1-222	ENST00000489772	INPP4B	O15327	924 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	OPA1	O60313	960 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	FGF1	P05230	155 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	PYGB	P11216	843 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	POLD2	P49005	469 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	GEM	P55040	296 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	DCDC1	P59894	354 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	PEX6	Q13608	980 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	MEI1	Q5TIA1	1274 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	ALS2CL	Q60I27	953 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	GUSBP11	Q6P575	273 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	TRIM74	Q86UV6	250 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	MARCH9	Q86YJ5	346 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	OR6C4	Q8NGE1	309 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	CCDC110	Q8TBZ0	833 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	GPBAR1	Q8TDU6	330 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	LRRC45	Q96CN5	670 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	EID2B	Q96D98	161 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	SCARF2	Q96GP6	870 aa	Predicted RBP	11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	COX14	Q96I36	57 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	ZSCAN5A	Q9BUG6	496 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	SPATA16	Q9BXB7	569 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	DPEP2	Q9H4A9	486 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	HACD3	Q9P035	362 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	TMEM98	Q9Y2Y6	226 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	GPSM3	Q9Y4H4	160 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	SPO11	Q9Y5K1	396 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	AKAP13	Q12802	2813 aa		11.02	□□□□□ -0.65
GGA1-222	ENST00000489772	FRY	Q5TBA9	3013 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	WDFY3	Q8IZQ1	3526 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	SHROOM3	Q8TF72	1996 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	C5orf60	A6NFR6	353 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	AURKA	O14965	403 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ASMTL	O95671	621 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	MT-CO3	P00414	261 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	FUCA1	P04066	466 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	PSMB4	P28070	264 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	HMGCL	P35914	325 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CHRNA4	P43681	627 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CLDN6	P56747	220 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	LRP8	Q14114	963 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ST3GAL2	Q16842	350 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ZNF569	Q5MCW4	686 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ZDHHC20	Q5W0Z9	365 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	PDPK2P	Q6A1A2	396 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ARHGEF18	Q6ZSZ5	1173 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	MARK2	Q7KZI7	788 aa	Known RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	GLT6D1	Q7Z4J2	308 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	GALNT13	Q8IUC8	556 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CACTIN-AS1	Q8N1I8	211 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	TRAM1L1	Q8N609	369 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	PDCD7	Q8N8D1	485 aa	Known RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	FAM71D	Q8N9W8	422 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	KDF1	Q8NAX2	398 aa	Predicted RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	KY	Q8NBH2	561 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	GPR26	Q8NDV2	337 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	TRIM58	Q8NG06	486 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	CCL4L1	Q8NHW4	92 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	BLOC1S5	Q8TDH9	187 aa		11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	PTCD2	Q8WV60	388 aa	Known RBP	11.01	□□□□□ -0.65
GGA1-222	ENST00000489772	ANP32B	Q92688	251 aa	Known RBP	11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms