RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 PAK5Q9P286 719 aa7.82□□□□□ -1.16
SSR1-210ENST00000489567 CNOT6Q9ULM6 557 aaKnown RBP7.82□□□□□ -1.16
SSR1-210ENST00000489567 SCN8AQ9UQD0 1980 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 TCRBV7S3A2A0A539 114 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 GAPDHSO14556 408 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 TOR1BO14657 336 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 INPP4BO15327 924 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 DFNA5O60443 496 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PIAS2O75928 621 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 APRTP07741 180 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 MYCLP1P12525 358 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 ZNF16P17020 682 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 JUNDP17535 347 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 DGKAP23743 735 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 ACTN2P35609 894 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 FDFT1P37268 417 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TNNT3P45378 269 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 ARRB1P49407 418 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 TERF1P54274 439 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 KIAA1024LP59773 190 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 C1orf61Q13536 156 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PTK2BQ14289 1009 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 ADAMTSL4Q6UY14 1074 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 RD3Q7Z3Z2 195 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 NLRP8Q86W28 1048 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 HID1Q8IV36 788 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 NAXDQ8IW45 347 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 PHACTR4Q8IZ21 702 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 OR52K1Q8NGK4 314 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 GLMNQ92990 594 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 C16orf45Q96MC5 204 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 WDR92Q96MX6 357 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PPP1R2P1Q96PQ5 205 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 RTKNQ9BST9 563 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 DDX47Q9H0S4 455 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 TRABDQ9H4I3 376 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 ARFGAP3Q9NP61 516 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 IL26Q9NPH9 171 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 KCTD5Q9NXV2 234 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TMPRSS11EQ9UL52 423 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TMEM98Q9Y2Y6 226 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PCDHGB2Q9Y5G2 931 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PCYT1BQ9Y5K3 369 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 OAS3Q9Y6K5 1087 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 MYLKQ15746 1914 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 RGSL1A5PLK6 1076 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 CACNB4O00305 520 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 CCL22O00626 93 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TRIM38O00635 465 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 LDB2O43679 373 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 SUN1O94901 812 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 KRT14P02533 472 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 CEACAM5P06731 702 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 HOXC4P09017 264 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 HTR1BP28222 390 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TEAD1P28347 426 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 HK3P52790 923 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 DCDC1P59894 354 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 SRP54P61011 504 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 BASP1P80723 227 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 PPARDQ03181 441 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 CAMK2BQ13554 666 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PUM1Q14671 1186 aaKnown RBP eCLIP7.81□□□□□ -1.161e-9■■□□□ 13.6
SSR1-210ENST00000489567 POU6F1Q14863 301 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 TAF1AQ15573 450 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 ATP13A5Q4VNC0 1218 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PRRT3Q5FWE3 981 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 CERCAMQ5T4B2 595 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 ZNF648Q5T619 568 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 DOK6Q6PKX4 331 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 OXR1Q8N573 874 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 ZNF548Q8NEK5 533 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 OR4K2Q8NGD2 314 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 OR56A4Q8NGH8 313 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 OR13C4Q8NGS5 318 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 BAHD1Q8TBE0 780 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 BRSK1Q8TDC3 778 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 SETD7Q8WTS6 366 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 COX14Q96I36 57 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 LRRC61Q9BV99 259 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 SPATA16Q9BXB7 569 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 FRMD8Q9BZ67 464 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 CLPBQ9H078 707 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 PHPT1Q9NRX4 125 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.81□□□□□ -1.162e-7■■■□□ 17.5
SSR1-210ENST00000489567 HACD3Q9P035 362 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 NFKBIL1Q9UBC1 381 aaPredicted RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 KLQ9UEF7 1012 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 APOBEC3BQ9UH17 382 aaKnown RBP7.81□□□□□ -1.16
SSR1-210ENST00000489567 ST14Q9Y5Y6 855 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 LRP4O75096 1905 aa7.81□□□□□ -1.16
SSR1-210ENST00000489567 CABIN1Q9Y6J0 2220 aa7.8□□□□□ -1.16
SSR1-210ENST00000489567 PRSS38A1L453 326 aa7.8□□□□□ -1.16
SSR1-210ENST00000489567 CCDC78A2IDD5 438 aa7.8□□□□□ -1.16
SSR1-210ENST00000489567 ERI2A8K979 691 aaKnown RBP7.8□□□□□ -1.16
SSR1-210ENST00000489567 E7EVH7 732 aa7.8□□□□□ -1.16
SSR1-210ENST00000489567 YKT6O15498 198 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms