RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CD58P19256 250 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CDK11BP21127 795 aaKnown RBP7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 ERCC5P28715 1186 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 SOX18P35713 384 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CXCR3P49682 368 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 AMPD3Q01432 767 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 STIM1Q13586 685 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 TPD52L1Q16890 204 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 ZACNQ401N2 412 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 RRAGBQ5VZM2 374 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 NADSYN1Q6IA69 706 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 PWWP2BQ6NUJ5 590 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 NLRP8Q86W28 1048 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 NRROSQ86YC3 692 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 SPPL2CQ8IUH8 684 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 BRSK2Q8IWQ3 736 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 SH2D3CQ8N5H7 860 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CHST14Q8NCH0 376 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CCDC150Q8NCX0 1101 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 ANKRD20A12PQ8NF67 263 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 SLC2A14Q8TDB8 520 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 NCSTNQ92542 709 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 ZNF592Q92610 1267 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 RNF34Q969K3 372 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 JAKMIP2Q96AA8 810 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CALML4Q96GE6 196 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 PAGE5Q96GU1 130 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 CDK5RAP3Q96JB5 506 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 NAP1L5Q96NT1 182 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 GBP5Q96PP8 586 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 KCNJ16Q9NPI9 418 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 IFNKQ9P0W0 207 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 TAAR2Q9P1P5 351 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 HECAQ9UBI9 543 aaPredicted RBP7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 ITM2BQ9Y287 266 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 OR1A2Q9Y585 309 aa7.43□□□□□ -1.22
EXOSC3-206ENST00000489414 RCCD1A6NED2 376 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 WNT7AO00755 349 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 LEFTY1O75610 366 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 WISP2O76076 250 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 TMEM191BP0C7N4 346 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 NID1P14543 1247 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 CCNB1P14635 433 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 L1CAMP32004 1257 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 PPP1R2P41236 205 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 FASLGP48023 281 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 PPM1FP49593 454 aaPredicted RBP7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 PLK1P53350 603 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 EPHB1P54762 984 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 UBASH3AP57075 661 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 FANCCQ00597 558 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 PDE1BQ01064 536 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 SLC12A1Q13621 1099 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 HAUS3Q68CZ6 603 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 SLFN12LQ6IEE8 588 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 RAB43Q86YS6 212 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 LRRC17Q8N6Y2 441 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 CATSPER1Q8NEC5 780 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 AGAP11Q8TF27 550 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 APOOQ9BUR5 198 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 C1QTNF7Q9BXJ2 289 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 NLNQ9BYT8 704 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 LRRC27Q9C0I9 530 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 CHST8Q9H2A9 424 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 IL36AQ9UHA7 158 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 PPT2Q9UMR5 302 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 R3HCC1Q9Y3T6 440 aaKnown RBP7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 ADGRG1Q9Y653 693 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 HS3ST4Q9Y661 456 aa7.42□□□□□ -1.22
EXOSC3-206ENST00000489414 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 LOC100653049A0A140TA62 436 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 TRIM49BA6NDI0 452 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 TMEM202A6NGA9 273 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 E9PMD0 336 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 HTRA2O43464 458 aaPredicted RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 PMPCBO75439 489 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 KRT34O76011 436 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 VENTXO95231 258 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 CNOT4O95628 575 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 CRYABP02511 175 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 RPN1P04843 607 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 FAM200BP0CF97 657 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 PDGFRAP16234 1089 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 SCP2P22307 547 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 DLX5P56178 289 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 FILIP1LQ4L180 1135 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 GRAMD1CQ8IYS0 662 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 CFAP52Q8N1V2 620 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 C4orf32Q8N8J7 132 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 OR56A4Q8NGH8 313 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 OR1N1Q8NGS0 311 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 PLEKHO2Q8TD55 490 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 ASB5Q8WWX0 329 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 MR1Q95460 341 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 TMEM125Q96AQ2 219 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 CCDC114Q96M63 670 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms