RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 OR14L1PQ8NHC6 308 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 MMABQ96EY8 250 aaPredicted RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 PGLYRP2Q96PD5 576 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 STRA6Q9BX79 667 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 PRKRIP1Q9H875 184 aaPredicted RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 SLC28A3Q9HAS3 691 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 TAS2R10Q9NYW0 307 aa3.58□□□□□ -1.84
RFC4-213ENST00000489028 CNOT8Q9UFF9 292 aaKnown RBP3.58□□□□□ -1.84
RFC4-213ENST00000489028 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 P2RY10O00398 339 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 PBX3P40426 434 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 USP8P40818 1118 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 APOBEC1P41238 236 aaKnown RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 F2RL1P55085 397 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 OLR1P78380 273 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 PDE1BQ01064 536 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 FOXD4Q12950 439 aaPredicted RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 OLIG2Q13516 323 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 KIF26BQ2KJY2 2108 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 TRNP1Q6NT89 227 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 BRAT1Q6PJG6 821 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 ATG9AQ7Z3C6 839 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 TMPRSS12Q86WS5 348 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 KCNH5Q8NCM2 988 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 APBB2Q92870 758 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 INTS12Q96CB8 462 aaKnown RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 RRNAD1Q96FB5 475 aaKnown RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 CDCA5Q96FF9 252 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 PCGF1Q9BSM1 259 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 FBRSL1Q9HCM7 1045 aaKnown RBP3.57□□□□□ -1.84
RFC4-213ENST00000489028 LTB4R2Q9NPC1 389 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 ABCF3Q9NUQ8 709 aa3.57□□□□□ -1.84
RFC4-213ENST00000489028 PTPRCP08575 1304 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 A0A1W2PPH5 198 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 A0A1W2PS18 150 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 C1orf226A1L170 272 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 SPINT2O43291 252 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 SEC14L2O76054 403 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 CETPP11597 493 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 KRT10P13645 584 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 ZNF182P17025 639 aaPredicted RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 FASLGP48023 281 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 RARSP54136 660 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 CLDN20P56880 219 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 FOXM1Q08050 763 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 DCTN2Q13561 401 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 FRG1Q14331 258 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 DECR1Q16698 335 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 INTS11Q5TA45 600 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 IRAK1BP1Q5VVH5 260 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 ATF7IPQ6VMQ6 1270 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 SLC38A5Q8WUX1 472 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 PIGTQ969N2 578 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 ALG14Q96F25 216 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 HES6Q96HZ4 224 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 UHRF2Q96PU4 802 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 SEC62Q99442 399 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 SYT17Q9BSW7 474 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 TRMT61BQ9BVS5 477 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 RANBP17Q9H2T7 1088 aaKnown RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 JMJD4Q9H9V9 463 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 POLR1BQ9H9Y6 1135 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 POU2F3Q9UKI9 436 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 ACSL5Q9ULC5 683 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 DLGAP4Q9Y2H0 992 aa3.56□□□□□ -1.84
RFC4-213ENST00000489028 GREB1LQ9C091 1923 aaPredicted RBP3.56□□□□□ -1.84
RFC4-213ENST00000489028 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 EIF3CLB5ME19 914 aaKnown RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 CAPN9O14815 690 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 SLC22A3O75751 556 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 GAS8-AS1O95177 125 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 MLYCDO95822 493 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 CD53P19397 219 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 TIMP3P35625 211 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 GNL1P36915 607 aaPredicted RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 FMO5P49326 533 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 CCR9P51686 369 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 LINC01547P58512 204 aaPredicted RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 RPL7AP62424 266 aaKnown RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 G3BP1Q13283 466 aaKnown RBP eCLIP3.55□□□□□ -1.84
RFC4-213ENST00000489028 GTF2H2Q13888 395 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 ZNF234Q14588 700 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 TBCEQ15813 527 aaPredicted RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 TSTQ16762 297 aaKnown RBP3.55□□□□□ -1.84
RFC4-213ENST00000489028 C18orf63Q68DL7 685 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 GTF2H2CQ6P1K8 395 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 ZNF449Q6P9G9 518 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 C19orf48Q6RUI8 117 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 CYP20A1Q6UW02 462 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 GSG1LQ6UXU4 331 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 PCYOX1LQ8NBM8 494 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 TMEM116Q8NCL8 245 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 SLC24A4Q8NFF2 622 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 LRRC8CQ8TDW0 803 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 SLC44A1Q8WWI5 657 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 TAAR8Q969N4 342 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 WDFY2Q96P53 400 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 EPYCQ99645 322 aa3.55□□□□□ -1.84
RFC4-213ENST00000489028 TAAR2Q9P1P5 351 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms