RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PIANPQ8IYJ0 282 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SIDT2Q8NBJ9 832 aaKnown RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 ADCY4Q8NFM4 1077 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 DLG3Q92796 817 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 L3HYPDHQ96EM0 354 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 C8orf48Q96LL4 319 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 PRICKLE1Q96MT3 831 aaPredicted RBP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SPAG4Q9NPE6 437 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLIC4-202ENST00000488683 FNIP2Q9P278 1114 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 CROTQ9UKG9 612 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 SARDHQ9UL12 918 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 MED16Q9Y2X0 877 aa12.64□□□□□ -0.39
CLIC4-202ENST00000488683 TMX2-CTNND1H3BSU7 103 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SEPT4O43236 478 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SRP72O76094 671 aaKnown RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PSMD8P48556 350 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 STX5Q13190 355 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 BIRC2Q13490 618 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SERINC3Q13530 473 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PSAPL1Q6NUJ1 521 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 GALNT7Q86SF2 657 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FAR2Q96K12 515 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 BTN2A3PQ96KV6 586 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 GPR21Q99679 349 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SH3GL3Q99963 347 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 TMEM79Q9BSE2 394 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 EPS15L1Q9UBC2 864 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 SUCOQ9UBS9 1254 aaKnown RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 RAB26Q9ULW5 256 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 ZFP37Q9Y6Q3 630 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 GBF1Q92538 1859 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 CLGNO14967 610 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FOXD2O60548 495 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 RHOBTB1O94844 696 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PRAMEF12O95522 483 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 ZNF37AP17032 561 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 HERVK_113P63132 956 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 RTP2Q5QGT7 225 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 CCSAPQ6IQ19 270 aaPredicted RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FAM45BPQ6NSW5 357 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 GLB1LQ6UWU2 654 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 DENND1CQ8IV53 801 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FAM45AQ8TCE6 357 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 NCSTNQ92542 709 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 FATE1Q969F0 183 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 CD300AQ9UGN4 299 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 ANKRD36A6QL64 1941 aa12.63□□□□□ -0.39
CLIC4-202ENST00000488683 CBX4O00257 560 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 KIF3CO14782 793 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 INPPL1O15357 1258 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 C8BP07358 591 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 CA5AP35218 305 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 GGT5P36269 586 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 IL10RBQ08334 325 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 IKBKEQ14164 716 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 MFSD14CQ5VZR4 134 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 C8orf82Q6P1X6 216 aaPredicted RBP12.62□□□□□ -0.39
CLIC4-202ENST00000488683 CHST15Q7LFX5 561 aaPredicted RBP12.62□□□□□ -0.39
CLIC4-202ENST00000488683 TMEM126BQ8IUX1 230 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 MFN1Q8IWA4 741 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ATP6V0D2Q8N8Y2 350 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ABCG8Q9H221 673 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ZNF225Q9UK10 706 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 DRGXA6NNA5 263 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 BTN3A1O00481 513 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 TLR5O60602 858 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 CKBP12277 381 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ACVR1Q04771 509 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 TRIP4Q15650 581 aaPredicted RBP12.62□□□□□ -0.39
CLIC4-202ENST00000488683 PAGE3Q5JUK9 113 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 OFCC1Q8IZS5 231 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 AFAP1L2Q8N4X5 818 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 FUBP3Q96I24 572 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLIC4-202ENST00000488683 FAM193BQ96PV7 902 aaPredicted RBP12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ZFYVE28Q9HCC9 887 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 TLR9Q9NR96 1032 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 CMTM6Q9NX76 183 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 SMPD4Q9NXE4 827 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 TMEM181Q9P2C4 612 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 BCAP29Q9UHQ4 241 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 RNF112Q9ULX5 631 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 PCDHB5Q9Y5E4 795 aa12.62□□□□□ -0.39
CLIC4-202ENST00000488683 ARHGEF37A1IGU5 675 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 AZIN1O14977 448 aa12.61□□□□□ -0.39
CLIC4-202ENST00000488683 KATNA1O75449 491 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms