RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GGNBP1Q5YKI7 109 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 METTL2BQ6P1Q9 378 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 WDR73Q6P4I2 378 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 GSG1LQ6UXU4 331 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 DPPA4Q7L190 304 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 TAOK1Q7L7X3 1001 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 ADGRF2Q8IZF7 708 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 DSELQ8IZU8 1212 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 PGBD5Q8N414 524 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 SRBD1Q8N5C6 995 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 OR8K5Q8NH50 307 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 LMO3Q8TAP4 145 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 TMED6Q8WW62 240 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 NSUN4Q96CB9 384 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 METTL2AQ96IZ6 378 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 RSRC1Q96IZ7 334 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 HARBI1Q96MB7 349 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 GAD1Q99259 594 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 NCAPGQ9BPX3 1015 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 CENPOQ9BU64 300 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 MMP25Q9NPA2 562 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 ACSS1Q9NUB1 689 aaPredicted RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 OCIAD1Q9NX40 245 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 FBXL17Q9UF56 701 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 SWAP70Q9UH65 585 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 TINAGQ9UJW2 476 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 AGO1Q9UL18 857 aaKnown RBP3.26□□□□□ -1.89
CD46-215ENST00000488596 SESN1Q9Y6P5 492 aa3.26□□□□□ -1.89
CD46-215ENST00000488596 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 A8MZ25 164 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 K7ENM7 598 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SOCS6O14544 535 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 WNT9BO14905 357 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 ATP2A1O14983 1001 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SCAMP1O15126 338 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 HCRTR2O43614 444 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 PAPSS2O95340 614 aaPredicted RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 GLUD1P00367 558 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 EGFP01133 1207 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 RB1P06400 928 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 ACAA1P09110 424 aaPredicted RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 CSH1P0DML2 217 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 CSH2P0DML3 217 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 GLUD2P49448 558 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 CAMPP49913 170 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 PDLIM4P50479 330 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SNX16P57768 344 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 PSMC6P62333 389 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 DSC1Q08554 894 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 GRIK2Q13002 908 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 DHX34Q14147 1143 aaKnown RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 PLCB4Q15147 1175 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 ASTE1Q2TB18 679 aaPredicted RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 XKR9Q5GH70 373 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 PMS2CLQ68D20 193 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 JADE1Q6IE81 842 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 DUS1LQ6P1R4 473 aaKnown RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 TMEM154Q6P9G4 183 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 C16orf54Q6UWD8 224 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SEPT14Q6ZU15 432 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 TICAM1Q8IUC6 712 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 TEX11Q8IYF3 940 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SGCDQ92629 289 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 RHBDF1Q96CC6 855 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 ORAI1Q96D31 301 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 CALML4Q96GE6 196 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 GRAMD2BQ96HH9 432 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 OR2A14Q96R47 310 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 MXD3Q9BW11 206 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 CCDC68Q9H2F9 335 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 PLK3Q9H4B4 646 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 SEBOXQ9HB31 216 aaPredicted RBP3.25□□□□□ -1.89
CD46-215ENST00000488596 COPG2Q9UBF2 871 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 CLIC4Q9Y696 253 aa3.25□□□□□ -1.89
CD46-215ENST00000488596 ATXN2Q99700 1313 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 CPED1A4D0V7 1026 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PLRG1O43660 514 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 HS6ST1O60243 411 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 KCNJ13O60928 360 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 TPPPO94811 219 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 TUBBP07437 444 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PRSS2P07478 247 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 ZNF12P17014 697 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 TMEM11P17152 192 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 ANXA7P20073 488 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 BDKRB2P30411 391 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PSMB10P40306 273 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 PRCPP42785 496 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 RRP1P56182 461 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 TAS2R40P59535 323 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 RPL36AP83881 106 aaKnown RBP3.24□□□□□ -1.89
CD46-215ENST00000488596 GRSF1Q12849 480 aaKnown RBP eCLIP3.24□□□□□ -1.89
CD46-215ENST00000488596 CHAF1BQ13112 559 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 ADIPOQQ15848 244 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 AMZ1Q400G9 498 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 RAB41Q5JT25 222 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 FAM69BQ5VUD6 431 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 NADSYN1Q6IA69 706 aa3.24□□□□□ -1.89
CD46-215ENST00000488596 ZNF280DQ6N043 979 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms