RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 TXNL4AP83876 142 aaKnown RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 CLCQ05315 142 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 DSC1Q08554 894 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 USP41Q3LFD5 358 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 SETMARQ53H47 684 aaPredicted RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 LGI2Q8N0V4 545 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 TSPAN14Q8NG11 270 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 DDI1Q8WTU0 396 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 EXOC2Q96KP1 924 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 UHRF1Q96T88 793 aaPredicted RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 SEPT5Q99719 369 aaPredicted RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 CRISPLD1Q9H336 500 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 CMTM6Q9NX76 183 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 NDUFAF1Q9Y375 327 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 H0YJX3 145 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 HTRA2O43464 458 aaPredicted RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 TPST1O60507 370 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 SERPINF2P08697 491 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 LBPP18428 481 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 SUOXP51687 545 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 DIO3P55073 304 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 TSNQ15631 228 aaKnown RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 FAM171A1Q5VUB5 890 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 SCIMPQ6UWF3 145 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 SAPCD2Q86UD0 394 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 CARM1Q86X55 608 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 FBXO39Q8N4B4 442 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 OR7D4Q8NG98 312 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 RHEBL1Q8TAI7 183 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 ASB2Q96Q27 587 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 TFB2MQ9H5Q4 396 aaKnown RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 TLR8Q9NR97 1041 aaKnown RBP17.88■□□□□ 0.45
VIM-206ENST00000487938 PTTG2Q9NZH5 202 aa17.88■□□□□ 0.45
VIM-206ENST00000487938 BBIP1A8MTZ0 92 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 CDC7O00311 574 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 SEPT4O43236 478 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 CRCPO75575 148 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 TACR2P21452 398 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 RPL10P27635 214 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 PRDX3P30048 256 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 NR1H2P55055 460 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 TBCELQ5QJ74 424 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 KRT80Q6KB66 452 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 TRIML2Q8N7C3 387 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 OR4K2Q8NGD2 314 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 ESAMQ96AP7 390 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 TMIGD2Q96BF3 282 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 RMDN1Q96DB5 314 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 HIC2Q96JB3 615 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 FAM193BQ96PV7 902 aaPredicted RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 CCT7Q99832 543 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 HOPXQ9BPY8 73 aaPredicted RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 SPON2Q9BUD6 331 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 NMRK2Q9NPI5 230 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 DUS2Q9NX74 493 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 IL37Q9NZH6 218 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 MED16Q9Y2X0 877 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 PDLIM1O00151 329 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 ENPP3O14638 875 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 ECI2O75521 394 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 CCND3P30281 292 aaPredicted RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 RGRP47804 291 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 AGTR2P50052 363 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 YBEYP58557 167 aaPredicted RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 CREB5Q02930 508 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 BIRC2Q13490 618 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 TRIM71Q2Q1W2 868 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 STAG3L4Q8TBR4 150 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 GIPC2Q8TF65 315 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 VPS33AQ96AX1 596 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 LRRC58Q96CX6 371 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 RPL10LQ96L21 214 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 CYP2S1Q96SQ9 504 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 PDFQ9HBH1 243 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 OLAHQ9NV23 265 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 DMTF1Q9Y222 760 aa17.87■□□□□ 0.45
VIM-206ENST00000487938 FNDC3AQ9Y2H6 1198 aaKnown RBP17.87■□□□□ 0.45
VIM-206ENST00000487938 ARHGAP10A1A4S6 786 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 H6PDO95479 791 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 EPOP01588 193 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 RPLP2P05387 115 aaKnown RBP17.86■□□□□ 0.45
VIM-206ENST00000487938 SLC10A3P09131 477 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 OGNP20774 298 aaKnown RBP17.86■□□□□ 0.45
VIM-206ENST00000487938 SCNN1BP51168 640 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 PLOD1Q02809 727 aaPredicted RBP17.86■□□□□ 0.45
VIM-206ENST00000487938 ERMP1Q7Z2K6 904 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 IFNEQ86WN2 208 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 ANKFN1Q8N957 763 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 DNAJB14Q8TBM8 379 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 KIAA1191Q96A73 305 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 TEX37Q96LM6 180 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 GPR21Q99679 349 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 SLC30A3Q99726 388 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 ZBED2Q9BTP6 218 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 OLA1Q9NTK5 396 aaKnown RBP17.86■□□□□ 0.45
VIM-206ENST00000487938 CCM2LQ9NUG4 571 aaPredicted RBP17.86■□□□□ 0.45
VIM-206ENST00000487938 ARMC1Q9NVT9 282 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 PLXNA3P51805 1871 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 FXYD1O00168 92 aa17.86■□□□□ 0.45
VIM-206ENST00000487938 KERAO60938 352 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms