RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SEPT5Q99719 369 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 GLIS2Q9BZE0 524 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 PPP1R3EQ9H7J1 279 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 POLR1BQ9H9Y6 1135 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 CNGB3Q9NQW8 809 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 OGFRQ9NZT2 677 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 ERRFI1Q9UJM3 462 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 AGO1Q9UL18 857 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 R3HDM2Q9Y2K5 976 aaKnown RBP3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 ADAM18Q9Y3Q7 739 aa3.79□□□□□ -1.8
HMGB1P36-201ENST00000487709 A0A087WYN8 130 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 DYTNA2CJ06 578 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 GOLGA6L9A6NEM1 432 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 A8MZ25 164 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 VCYO14598 125 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 ACOT8O14734 319 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 HSPA12AO43301 675 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 DOK2O60496 412 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 LDHCP07864 332 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 CSH1P0DML2 217 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 CSH2P0DML3 217 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 RARGP13631 454 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 HOXA13P31271 388 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 MXI1P50539 228 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 PMS2P54278 862 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 NLRP5P59047 1200 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 CREB5Q02930 508 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 CRYZQ08257 329 aaKnown RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 EPS8Q12929 822 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 IKQ13123 557 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 ACVR2BQ13705 512 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 HNF4GQ14541 408 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 ATP13A5Q4VNC0 1218 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 FAM205BPQ63HN1 556 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 SLC36A4Q6YBV0 504 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 DPPA4Q7L190 304 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 SPATA2LQ8IUW3 424 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 SPATA6LQ8N4H0 392 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 PRR26Q8N8Z3 221 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 KCNH5Q8NCM2 988 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 MCUQ8NE86 351 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 PERPQ96FX8 193 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 WDFY2Q96P53 400 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 C1QTNF5Q9BXJ0 243 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 TKTL2Q9H0I9 626 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 MKKSQ9NPJ1 570 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 DDX4Q9NQI0 724 aaKnown RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 COPG2Q9UBF2 871 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 ADD3Q9UEY8 706 aaKnown RBP3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 TBC1D29Q9UFV1 150 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 PCDHA7Q9UN72 937 aa3.78□□□□□ -1.8
HMGB1P36-201ENST00000487709 A0A1W2PQF6 199 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 hDV102S1A0JD36 115 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 FRMD3A2A2Y4 597 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 LINC01553A4QN01 128 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 LRRC72A6NJI9 287 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 CDRT15L2A8MXV6 281 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 INAFM1C9JVW0 142 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 LINC01565O15544 149 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 GFPT2O94808 682 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 STARD3NLO95772 234 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 BDNFP23560 247 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 TM4SF1P30408 202 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 HOXD13P35453 343 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 MATR3P43243 847 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 CAMPP49913 170 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 CLCNKAP51800 687 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 RRP1P56182 461 aaKnown RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 GRIK2Q13002 908 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 TRAF1Q13077 416 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 PNLIPRP3Q17RR3 467 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 MYLK3Q32MK0 819 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 AMZ1Q400G9 498 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 DCST1Q5T197 706 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 FRG2Q64ET8 278 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 SZRD1Q7Z422 152 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 HAPLN4Q86UW8 402 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 ARID3BQ8IVW6 561 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 IQCF1Q8N6M8 205 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 OR14L1PQ8NHC6 308 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 ELP5Q8TE02 316 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 PPP4R1Q8TF05 950 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 ZKSCAN4Q969J2 545 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 ACOX2Q99424 681 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 GHITMQ9H3K2 345 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 PDZD7Q9H5P4 517 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 STK39Q9UEW8 545 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 CNOT8Q9UFF9 292 aaKnown RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 OR14J1Q9UGF5 321 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 CHORDC1Q9UHD1 332 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 TTLL3Q9Y4R7 772 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 SNX8Q9Y5X2 465 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 NFS1Q9Y697 457 aa3.77□□□□□ -1.81
HMGB1P36-201ENST00000487709 LOC100509620A0A075B734 347 aa3.76□□□□□ -1.81
HMGB1P36-201ENST00000487709 A0A0U1RQJ8 604 aa3.76□□□□□ -1.81
HMGB1P36-201ENST00000487709 hCG_1807616A0A1W2PRN6 198 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms