RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PPIL1Q9Y3C6 166 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 KCTD3Q9Y597 815 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 CELSR2Q9HCU4 2923 aa15.25■□□□□ 0.03
MCF2L-228ENST00000487354 LRBAP50851 2863 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 MN1Q10571 1320 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-228ENST00000487354 CREBBPQ92793 2442 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 GOLGA6CA6NDK9 693 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 GOLGA6BA6NDN3 693 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 DNAJC6O75061 913 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PGLSO95336 258 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 GOLGA6DP0CG33 693 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PEX6Q13608 980 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 IHHQ14623 411 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 ESPL1Q14674 2120 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 MARK2Q7KZI7 788 aaKnown RBP15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PDCD6IPQ8WUM4 868 aaKnown RBP15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PIH1D2Q8WWB5 315 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 SCAMP4Q969E2 229 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 SCRN2Q96FV2 425 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 SARS2Q9NP81 518 aaKnown RBP15.24■□□□□ 0.03
MCF2L-228ENST00000487354 GOLGA6AQ9NYA3 693 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 TBC1D29Q9UFV1 150 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PHTF1Q9UMS5 762 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 RPS6KL1Q9Y6S9 549 aa15.24■□□□□ 0.03
MCF2L-228ENST00000487354 PRRC2CQ9Y520 2896 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 EIF3CLB5ME19 914 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 PDHA1P08559 390 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 CYP2A6P11509 494 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 CTPS1P17812 591 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 EEF1GP26641 437 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 GPR1P46091 355 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 RENBPP51606 427 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 GFERP55789 205 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 MC1RQ01726 317 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 HHEXQ03014 270 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 NFATC2Q13469 925 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 LRP8Q14114 963 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 LRRC66Q68CR7 880 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 ATCAYQ86WG3 371 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 MCOLN2Q8IZK6 566 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 ESX1Q8N693 406 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 PAF1Q8N7H5 531 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 AHCYL2Q96HN2 611 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 ZNF599Q96NL3 588 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 EIF3CQ99613 913 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 SYT11Q9BT88 431 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 TRIM7Q9C029 511 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 ZMYND15Q9H091 742 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 TRIT1Q9H3H1 467 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 ETNK2Q9NVF9 386 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 DONSONQ9NYP3 566 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 OGFRQ9NZT2 677 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 CWC15Q9P013 229 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 PRKAB1Q9Y478 270 aa15.23■□□□□ 0.03
MCF2L-228ENST00000487354 OAS3Q9Y6K5 1087 aaKnown RBP15.23■□□□□ 0.03
MCF2L-228ENST00000487354 DOPEY1Q5JWR5 2465 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 A0A1W2PQ67 120 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 FZD6O60353 706 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 ANKRD34CP0C6C1 535 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 GNLYP22749 145 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 EPHA4P54764 986 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 MAXP61244 160 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 PTSQ03393 145 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 MAMLD1Q13495 774 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 SEPT6Q14141 434 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 KRT31Q15323 416 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 ERMARDQ5T6L9 678 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 CDKAL1Q5VV42 579 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 KDELC2Q7Z4H8 507 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 GALNT13Q8IUC8 556 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 CCDC13Q8IYE1 715 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 NCSTNQ92542 709 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 AP2M1Q96CW1 435 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 WDR24Q96S15 920 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 KLHL3Q9UH77 587 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 PCSK1NQ9UHG2 260 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 CROTQ9UKG9 612 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 TLK1Q9UKI8 766 aa15.22■□□□□ 0.03
MCF2L-228ENST00000487354 CNOT6Q9ULM6 557 aaKnown RBP15.22■□□□□ 0.03
MCF2L-228ENST00000487354 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-228ENST00000487354 ATMINO43313 823 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-228ENST00000487354 MAFKO60675 156 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 SEMA7AO75326 666 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 C9P02748 559 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 MAN1A1P33908 653 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 DLSTP36957 453 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 PMS2P54278 862 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 ZNF235Q14590 738 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 PPP6R3Q5H9R7 873 aaPredicted RBP15.21■□□□□ 0.03
MCF2L-228ENST00000487354 ASB18Q6ZVZ8 466 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 ZNF765Q7L2R6 523 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 NLRP8Q86W28 1048 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 AGPAT1Q99943 283 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 TRIM55Q9BYV6 548 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 CLSTN2Q9H4D0 955 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 PRDM8Q9NQV8 689 aa15.21■□□□□ 0.03
MCF2L-228ENST00000487354 CSMD1Q96PZ7 3565 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms