RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ZWILCHQ9H900 591 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 ETNK2Q9NVF9 386 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 LIMA1Q9UHB6 759 aaKnown RBP19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 PPIL1Q9Y3C6 166 aa19.33■□□□□ 0.68
SMPDL3A-202ENST00000487215 MAFKO60675 156 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 LRCH4O75427 683 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 RALGPS1Q5JS13 557 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 LRRC66Q68CR7 880 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 PPP1R2P3Q6NXS1 205 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 WDR74Q6RFH5 385 aaPredicted RBP19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 CEACAM20Q6UY09 585 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 IRF2BP2Q7Z5L9 587 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 GALNT13Q8IUC8 556 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 BBS5Q8N3I7 341 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 PIH1D2Q8WWB5 315 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 SCAMP4Q969E2 229 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 ABHD17AQ96GS6 310 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 SMIM14Q96QK8 99 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 AGAP2Q99490 1192 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 EFHD1Q9BUP0 239 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 APMAPQ9HDC9 416 aa19.32■□□□□ 0.68
SMPDL3A-202ENST00000487215 H3BRJ5 948 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 PDHA1P08559 390 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 CCDC172P0C7W6 258 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 AMPD1P23109 780 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 MAN1A1P33908 653 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 MMP13P45452 471 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 HHEXQ03014 270 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 ABHD18Q0P651 414 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 NCAPHQ15003 741 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 DEFB109BQ30KR1 87 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 TMCO3Q6UWJ1 677 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 APOBEC4Q8WW27 367 aaKnown RBP19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 STARD8Q92502 1023 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 COX14Q96I36 57 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 ZPBPQ9BS86 351 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 FBXO8Q9NRD0 319 aa19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 TMEM184BQ9Y519 407 aaPredicted RBP19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 PCYT1BQ9Y5K3 369 aaPredicted RBP19.31■□□□□ 0.68
SMPDL3A-202ENST00000487215 FZD6O60353 706 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 STK17BO94768 372 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 ATP1A3P13637 1013 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 PTSQ03393 145 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 NFATC2Q13469 925 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 DPYSL2Q16555 572 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 ATP1A1-AS1Q5TC04 95 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 MARC1Q5VT66 337 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 ZNF765Q7L2R6 523 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 KDELC2Q7Z4H8 507 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 ATPAF2Q8N5M1 289 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 ANKRD20A12PQ8NF67 263 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 NCSTNQ92542 709 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 SARS2Q9NP81 518 aaKnown RBP19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 MAN2B2Q9Y2E5 1009 aa19.3■□□□□ 0.68
SMPDL3A-202ENST00000487215 INPP4BO15327 924 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 DLGAP3O95886 979 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 PYGLP06737 847 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 IL1R2P27930 398 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 ARL4AP40617 200 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 SMTNL2Q2TAL5 461 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 LACTB2Q53H82 288 aaPredicted RBP19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 POLNQ7Z5Q5 900 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 NLRP8Q86W28 1048 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 NSMCE1Q8WV22 266 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 CSPG4P5Q96PW8 444 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 TRIT1Q9H3H1 467 aaKnown RBP19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 CNOT8Q9UFF9 292 aaKnown RBP19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 TBC1D29Q9UFV1 150 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 PLAAQ9Y263 795 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 PRKAB1Q9Y478 270 aa19.29■□□□□ 0.68
SMPDL3A-202ENST00000487215 DNAJC6O75061 913 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 ASMTLO95671 621 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 TCF4P15884 667 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 ZNF30P17039 623 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 TCN2P20062 427 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 STAT5AP42229 794 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 MAPK9P45984 424 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 STC1P52823 247 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 CDH6P55285 790 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 MC1RQ01726 317 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 CRTC2Q53ET0 693 aaPredicted RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 C16orf46Q6P387 395 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 IYDQ6PHW0 289 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 CHST15Q7LFX5 561 aaPredicted RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 APTXQ7Z2E3 356 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 NDUFAF2Q8N183 169 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 FAM26EQ8N5C1 309 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 EXD1Q8NHP7 514 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 RIOK2Q9BVS4 552 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 STN1Q9H668 368 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 NT5MQ9NPB1 228 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 KLHL3Q9UH77 587 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 ZNHIT2Q9UHR6 403 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 MRPS18BQ9Y676 258 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 OAS3Q9Y6K5 1087 aaKnown RBP19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 LRRK2Q5S007 2527 aa19.28■□□□□ 0.68
SMPDL3A-202ENST00000487215 A0A0J9YYE9 177 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 A6NCN8 305 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 LRRC10BA6NIK2 292 aa19.27■□□□□ 0.68
SMPDL3A-202ENST00000487215 PRR19A6NJB7 356 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms