RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 ACVR1Q04771 509 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SPEM2Q0P670 501 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 CALCOCO2Q13137 446 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 PTK2BQ14289 1009 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 CCDC38Q502W7 563 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 TSTD2Q5T7W7 516 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 IL27RAQ6UWB1 636 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 PTAR1Q7Z6K3 402 aaPredicted RBP19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SLC22A18ASQ8N1D0 253 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 GPR161Q8N6U8 529 aaKnown RBP19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 FUBP1Q96AE4 644 aaKnown RBP19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 CDKN2AIPNLQ96HQ2 116 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 DNAJC1Q96KC8 554 aaKnown RBP19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SIGLEC10Q96LC7 697 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SPATA16Q9BXB7 569 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 WDR26Q9H7D7 661 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 ERVMER34-1Q9H9K5 563 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 PHPT1Q9NRX4 125 aaPredicted RBP19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SYBUQ9NX95 663 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 GRHL1Q9NZI5 618 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 SOX13Q9UN79 622 aa19.27■□□□□ 0.68
PCOLCE-208ENST00000487172 USP34Q70CQ2 3546 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 PCDH15Q96QU1 1955 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 SPTY2D1-AS1A0A0U1RR47 76 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 FADS2P1A8MWK0 482 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CACNB4O00305 520 aaPredicted RBP19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 GAPDHSO14556 408 aaPredicted RBP19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 ARHGAP33O14559 1287 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CDK3Q00526 305 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 SLC7A5Q01650 507 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CAV1Q03135 178 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 ITGA9Q13797 1035 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CCDC6Q16204 474 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 KIF19Q2TAC6 998 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 ALS2CLQ60I27 953 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 LAYNQ6UX15 382 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 HEATR4Q86WZ0 1026 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 SPATS2Q86XZ4 545 aaKnown RBP19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 PDIK1LQ8N165 341 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 COX14Q96I36 57 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 VPS35Q96QK1 796 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 PARD6AQ9NPB6 346 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CHRAC1Q9NRG0 131 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 DMGDHQ9UI17 866 aaKnown RBP19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 FKBPLQ9UIM3 349 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 CNOT6Q9ULM6 557 aaKnown RBP19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 OR1A2Q9Y585 309 aa19.26■□□□□ 0.67
PCOLCE-208ENST00000487172 AGAP14A8MT82 685 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 MYCLP1P12525 358 aaPredicted RBP19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 KELP23276 732 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 HTR1BP28222 390 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 THOP1P52888 689 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 CRADDP78560 199 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 TMPRSS15P98073 1019 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 GRIK2Q13002 908 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 PEX6Q13608 980 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 PDE1CQ14123 709 aaPredicted RBP19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 NFATC4Q14934 902 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 KDM7AQ6ZMT4 941 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 DCLK2Q8N568 766 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 OXR1Q8N573 874 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 OR13J1Q8NGT2 312 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 ZNF398Q8TD17 642 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 BTN2A2Q8WVV5 523 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 ART4Q93070 314 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 HIC2Q96JB3 615 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 ZNF778Q96MU6 729 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 LGR4Q9BXB1 951 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 SMOC1Q9H4F8 434 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 GDF3Q9NR23 364 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 TREX1Q9NSU2 369 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 SNX11Q9Y5W9 270 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 CACNA1EQ15878 2313 aa19.25■□□□□ 0.67
PCOLCE-208ENST00000487172 GPR179Q6PRD1 2367 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 FAM237BA0A1B0GVD1 139 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 DFNA5O60443 496 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 SRP72O76094 671 aaKnown RBP19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 DHX9Q08211 1270 aaKnown RBP19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 FZD2Q14332 565 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 CHRNA6Q15825 494 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 ZNF423Q2M1K9 1284 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 ATP13A5Q4VNC0 1218 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 DNAJC21Q5F1R6 531 aaKnown RBP19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 TPRG1LQ5T0D9 272 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 FNBP1LQ5T0N5 605 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 TCEAL6Q6IPX3 200 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 FAM151BQ6UXP7 276 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 AGGF1Q8N302 714 aaeCLIP19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 MPP5Q8N3R9 675 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 TCEAL3Q969E4 200 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 GLYATL1Q969I3 302 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 LRRC39Q96DD0 335 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 SGSM3Q96HU1 749 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 TBATAQ96M53 351 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 WDR92Q96MX6 357 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 SMOXQ9NWM0 555 aa19.24■□□□□ 0.67
PCOLCE-208ENST00000487172 E7ESA3 106 aa19.23■□□□□ 0.67
PCOLCE-208ENST00000487172 TNFRSF10CO14798 259 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms