RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 RCOR3Q9P2K3 495 aaPredicted RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SYNJ2BP-COX16A0A087WUM0 186 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 UPK1BO75841 260 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SOAT2O75908 522 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 LRIG2O94898 1065 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 SEC24AO95486 1093 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 DLGAP3O95886 979 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 CHRNA1P02708 482 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 GJB1P08034 283 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 PCNAP12004 261 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 POLR2EP19388 210 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 NFKB1P19838 968 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 NOS2P35228 1153 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 PIGAP37287 484 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 UGP2Q16851 508 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 RBM23Q86U06 439 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 AFG1LQ8WV93 481 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 MBOAT4Q96T53 435 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 AMBRA1Q9C0C7 1298 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 MRM3Q9HC36 420 aaKnown RBP10.62□□□□□ -0.71
CCDC171-208ENST00000486641 NECTIN3Q9NQS3 549 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 COX16Q9P0S2 106 aa10.62□□□□□ -0.71
CCDC171-208ENST00000486641 IGKV6D-21A0A0A0MT36 114 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 H3BMM5 538 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 INO80B-WBP1J3KQ70 363 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 VWA5AO00534 786 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ACKR2O00590 384 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NOBOXO60393 691 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DNAJB5O75953 348 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SUPT7LO94864 414 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 STAG3L1P0CL83 205 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 MAGP20916 626 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 EIF2DP41214 584 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 POLD2P49005 469 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NCS1P62166 190 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 PITX1P78337 314 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 VAC14Q08AM6 782 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 GALNT1Q10472 559 aaPredicted RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NFYCQ13952 458 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CRY1Q16526 586 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 IER5Q5VY09 327 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SLX4IPQ5VYV7 408 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 TTC23Q5W5X9 447 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ANKRD34AQ69YU3 496 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ESRP1Q6NXG1 681 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DCP1BQ8IZD4 617 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 POC5Q8NA72 575 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NDRG1Q92597 394 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ATG4CQ96DT6 458 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CCDC126Q96EE4 140 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CDK5RAP1Q96SZ6 601 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 MRPL45Q9BRJ2 306 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 TRIM54Q9BYV2 358 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 C2orf40Q9H1Z8 148 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 MUC13Q9H3R2 512 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DSN1Q9H410 356 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 EXD2Q9NVH0 621 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SLAMF8Q9P0V8 285 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DSEQ9UL01 958 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CARD8Q9Y2G2 431 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NME7Q9Y5B8 376 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DNAJC15Q9Y5T4 150 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ANKRD31Q8N7Z5 1873 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NRCAMQ92823 1304 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 FAM172BPA6NC97 362 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ERI2A8K979 691 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 AP3B1O00203 1094 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SLC1A7O00341 560 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 PPP6CO00743 305 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DCLK1O15075 740 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 IDH3BO43837 385 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 TBC1D4O60343 1298 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 IMPDH1P20839 514 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 ARNTP27540 789 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 TGFBR1P36897 503 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SLC1A2P43004 574 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SULT1E1P49888 294 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 KPNA2P52292 529 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 BCAT1P54687 386 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CDH13P55290 713 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 TSPY1Q01534 308 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 FOXM1Q08050 763 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 BST2Q10589 180 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CDH17Q12864 832 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SPATS1Q496A3 300 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CCDC58Q4VC31 144 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 PAGE3Q5JUK9 113 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 RBM20Q5T481 1227 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 STEAP3Q658P3 488 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 DESI1Q6ICB0 168 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 NEK10Q6ZWH5 1172 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 CNTN4Q8IWV2 1026 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 C7orf31Q8N865 590 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 LPAR1Q92633 364 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SLIRPQ9GZT3 109 aaKnown RBP10.61□□□□□ -0.71
CCDC171-208ENST00000486641 MIR1-1HGQ9H1L0 117 aa10.61□□□□□ -0.71
CCDC171-208ENST00000486641 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms