RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 SEL1LQ9UBV2 794 aa1.97□□□□□ -2.09
COMMD6-211ENST00000486516 ACAD8Q9UKU7 415 aa1.97□□□□□ -2.09
COMMD6-211ENST00000486516 VDAC3Q9Y277 283 aa1.97□□□□□ -2.09
COMMD6-211ENST00000486516 PCDHGB5Q9Y5G0 923 aa1.97□□□□□ -2.09
COMMD6-211ENST00000486516 SNX9Q9Y5X1 595 aa1.97□□□□□ -2.09
COMMD6-211ENST00000486516 SOS1Q07889 1333 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 LOC105369274A0A096LPK9 316 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 IGKV6D-21A0A0A0MT36 114 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 LOC102723532A0A0G2JNH3 316 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 C17orf113A0A1B0GUU1 675 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 A0A1W2PS18 150 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 DDTLA6NHG4 134 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAM90A7PA6NKC0 464 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAM90A22PA8MWA6 464 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAM90A12PA8MX19 464 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAM90A23PA8MXZ1 464 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PTGES3LE9PB15 166 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PEX12O00623 359 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SH2B2O14492 632 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TNPO2O14787 897 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 VILLO15195 856 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NKX2-8O15522 239 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SLC7A4O43246 635 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ADAM20O43506 726 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 DHX16O60231 1041 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PRKNO60260 465 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 BEST1O76090 585 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 HSPA1AP0DMV8 641 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 HSPA1BP0DMV9 641 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PSMA4P25789 261 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 CALRP27797 417 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 CDC25CP30307 473 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 RFC1P35251 1148 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ARL3P36405 182 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NNMTP40261 264 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 GARSP41250 739 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FMO5P49326 533 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SNX16P57768 344 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ZNF155Q12901 538 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 EPS8Q12929 822 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 STK4Q13043 487 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 CHAF1BQ13112 559 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 DCTN2Q13561 401 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TNFAIP1Q13829 316 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NFIL3Q16649 462 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAM171A1Q5VUB5 890 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NAA35Q5VZE5 725 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SYNE3Q6ZMZ3 975 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 C15orf39Q6ZRI6 1047 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 MFSD6Q6ZSS7 791 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 IKBIPQ70UQ0 350 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 DNAJB7Q7Z6W7 309 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PRPF39Q86UA1 669 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TRABD2AQ86V40 505 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 KRTAP11-1Q8IUC1 163 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 OR4N4Q8N0Y3 316 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SLC34A3Q8N130 599 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TTC39CQ8N584 583 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 LINC00612Q8N6U2 182 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 KCTD6Q8NC69 237 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SLC2A12Q8TD20 617 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 HCAR2Q8TDS4 363 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ZNF473Q8WTR7 871 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 WDR60Q8WVS4 1066 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 HMGB4Q8WW32 186 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NCSTNQ92542 709 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SH3KBP1Q96B97 665 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 VMP1Q96GC9 406 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 CALML4Q96GE6 196 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 RBM17Q96I25 401 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 CDHR1Q96JP9 859 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 FAR2Q96K12 515 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 LRR1Q96L50 414 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 C3orf30Q96M34 536 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 JAKMIP1Q96N16 626 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PAAF1Q9BRP4 392 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NUDT22Q9BRQ3 303 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 GPATCH1Q9BRR8 931 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 STN1Q9H668 368 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 NOX4Q9NPH5 578 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TLR8Q9NR97 1041 aaKnown RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TMEM51Q9NW97 253 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 TAS2R10Q9NYW0 307 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SLC25A10Q9UBX3 287 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SIX4Q9UIU6 781 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ZHX1Q9UKY1 873 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 ZNF215Q9UL58 517 aaPredicted RBP1.96□□□□□ -2.1
COMMD6-211ENST00000486516 GDAQ9Y2T3 454 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 SNX5Q9Y5X3 404 aa1.96□□□□□ -2.1
COMMD6-211ENST00000486516 PI4K2BG5E9Z4 385 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 LARGE1O95461 756 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 ACP5P13686 325 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 PSMB10P40306 273 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 PAFAH1B1P43034 410 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 TNNT3P45378 269 aaPredicted RBP1.95□□□□□ -2.1
COMMD6-211ENST00000486516 ADORA2A-AS1P86434 159 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 PLIN5Q00G26 463 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 RUNX1T1Q06455 604 aa1.95□□□□□ -2.1
COMMD6-211ENST00000486516 LRMPQ12912 555 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms