RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SLC46A3Q7Z3Q1 461 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.67□□□□□ -1.82
GCFC2-209ENST00000486016 CPOQ8IVL8 374 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 SRBD1Q8N5C6 995 aaKnown RBP3.67□□□□□ -1.82
GCFC2-209ENST00000486016 FCAMRQ8WWV6 532 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 PABPC5Q96DU9 382 aaKnown RBP3.67□□□□□ -1.82
GCFC2-209ENST00000486016 PPP1R13BQ96KQ4 1090 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 EGFL8Q99944 293 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 TFB2MQ9H5Q4 396 aaKnown RBP3.67□□□□□ -1.82
GCFC2-209ENST00000486016 SMAD5-AS1Q9Y6J3 95 aa3.67□□□□□ -1.82
GCFC2-209ENST00000486016 SEC14L5O43304 696 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 CTSVO60911 334 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 PRSS56P0CW18 603 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 GNB3P16520 340 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 LUMP51884 338 aaPredicted RBP3.66□□□□□ -1.82
GCFC2-209ENST00000486016 NAE1Q13564 534 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 SFMBT2Q5VUG0 894 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 RAD9BQ6WBX8 426 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 PQLC2Q6ZP29 291 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 C15orf39Q6ZRI6 1047 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 HAPLN4Q86UW8 402 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 ACVR1CQ8NER5 493 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 OR52I2Q8NH67 350 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 HMGCLL1Q8TB92 370 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 LRR1Q96L50 414 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 NEURL2Q9BR09 285 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 INTS2Q9H0H0 1204 aaKnown RBP3.66□□□□□ -1.82
GCFC2-209ENST00000486016 SEBOXQ9HB31 216 aaPredicted RBP3.66□□□□□ -1.82
GCFC2-209ENST00000486016 PRSS21Q9Y6M0 314 aa3.66□□□□□ -1.82
GCFC2-209ENST00000486016 SMCHD1A6NHR9 2005 aa3.65□□□□□ -1.82
GCFC2-209ENST00000486016 A0A087X002 238 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 A0A1W2PQM1 296 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 C5orf60A6NFR6 353 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 PSMC2P35998 433 aaKnown RBP3.65□□□□□ -1.83
GCFC2-209ENST00000486016 GABRB2P47870 512 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 ARCN1P48444 511 aaKnown RBP3.65□□□□□ -1.83
GCFC2-209ENST00000486016 CSNK2A1P68400 391 aaPredicted RBP3.65□□□□□ -1.83
GCFC2-209ENST00000486016 SORDQ00796 357 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.65□□□□□ -1.83
GCFC2-209ENST00000486016 DECR1Q16698 335 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 OR7E24Q6IFN5 339 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF248Q8NDW4 579 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 CSNK2A3Q8NEV1 391 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 TM9SF4Q92544 642 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF354BQ96LW1 612 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 QRFPRQ96P65 431 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 POLG2Q9UHN1 485 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 CNOT7Q9UIV1 285 aaKnown RBP3.65□□□□□ -1.83
GCFC2-209ENST00000486016 A4GNTQ9UNA3 340 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 ERVK-11Q9UQG0 969 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 CEPT1Q9Y6K0 416 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 SCINQ9Y6U3 715 aa3.65□□□□□ -1.83
GCFC2-209ENST00000486016 LDLRAD4O15165 306 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 GUCY1B2O75343 617 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 CD48P09326 243 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 IRF1P10914 325 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 CHRNB4P30926 498 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 HOXC8P31273 242 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 TAS2R38P59533 333 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 UFM1P61960 85 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 LMO4P61968 165 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 UBE3AQ05086 875 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 NFIL3Q16649 462 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 TECRLQ5HYJ1 363 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 C10orf62Q5T681 223 aaPredicted RBP3.64□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF704Q6ZNC4 412 aaPredicted RBP3.64□□□□□ -1.83
GCFC2-209ENST00000486016 LRRC8DQ7L1W4 858 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 TRPT1Q86TN4 253 aaKnown RBP3.64□□□□□ -1.83
GCFC2-209ENST00000486016 STPG4Q8N801 248 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 THAP6Q8TBB0 222 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 TAAR8Q969N4 342 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 ORAI1Q96D31 301 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 LINGO1Q96FE5 620 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 ATOH8Q96SQ7 321 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 H2AFJQ9BTM1 129 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 ISCA1Q9BUE6 129 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 LTB4R2Q9NPC1 389 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 SLC52A3Q9NQ40 469 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 ACSL5Q9ULC5 683 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 UTYO14607 1347 aa3.64□□□□□ -1.83
GCFC2-209ENST00000486016 HHLA1C9JL84 531 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 SPINT2O43291 252 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 HOXB5P09067 269 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 ZNF26P17031 533 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-209ENST00000486016 POLR2CP19387 275 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-209ENST00000486016 PGM1P36871 562 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 APOBEC1P41238 236 aaKnown RBP3.63□□□□□ -1.83
GCFC2-209ENST00000486016 NOVP48745 357 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 DRG2P55039 364 aaKnown RBP3.63□□□□□ -1.83
GCFC2-209ENST00000486016 FOXM1Q08050 763 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 SLC1A5Q15758 541 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 TMEM35AQ53FP2 167 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 C18orf63Q68DL7 685 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 TTI2Q6NXR4 508 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 SLC22A25Q6T423 547 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 ATG9AQ7Z3C6 839 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 ZCCHC10Q8TBK6 192 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 SLC38A5Q8WUX1 472 aa3.63□□□□□ -1.83
GCFC2-209ENST00000486016 CCT6BQ92526 530 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms