RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 F7P08709 466 aaPredicted RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 CHN1P15882 459 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 NDUFV2P19404 249 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 GABRB3P28472 473 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 CA5AP35218 305 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 HADHAP40939 763 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 NBL1P41271 181 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 SPINT3P49223 89 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 DCDC1P59894 354 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 ZBTB16Q05516 673 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 ELP6Q0PNE2 266 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 TYSND1Q2T9J0 566 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 HSP90AA5PQ58FG0 334 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 NEPROQ6NW34 567 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 FBXL19Q6PCT2 694 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 PACS1Q6VY07 963 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 GALNT7Q86SF2 657 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 SLC26A11Q86WA9 606 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 LRRC6Q86X45 466 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 DENND6AQ8IWF6 608 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 LMNTD2Q8IXW0 634 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 CYP4X1Q8N118 509 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 PAF1Q8N7H5 531 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 C2CD4AQ8NCU7 369 aaPredicted RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 CHMP6Q96FZ7 201 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 COQ10AQ96MF6 247 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 CCT8L2Q96SF2 557 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 FAM167BQ9BTA0 163 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 BPIFA1Q9NP55 256 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 SSU72Q9NP77 194 aaKnown RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 IARS2Q9NSE4 1012 aaKnown RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 NKIRAS1Q9NYS0 192 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 PSMC3IPQ9P2W1 217 aaPredicted RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 SCML1Q9UN30 329 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 SMG5Q9UPR3 1016 aaKnown RBP11.28□□□□□ -0.6
SND1-212ENST00000485871 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
SND1-212ENST00000485871 TRBV5-4A0A0C4DH59 114 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PLRG1O43660 514 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 RNASEH1O60930 286 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 IGLV3-19P01714 112 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PRSS56P0CW18 603 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 OGNP20774 298 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 NFKBIAP25963 317 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 MC4RP32245 332 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 GP5P40197 560 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 SLC1A2P43004 574 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 SLCO1A2P46721 670 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 LIG3P49916 1009 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PRAMEP78395 509 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 ARHGEF7Q14155 803 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 CWF19L1Q69YN2 538 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 ERAP2Q6P179 960 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 USP30Q70CQ3 517 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PTAR1Q7Z6K3 402 aaPredicted RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 CACUL1Q86Y37 369 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 CILP2Q8IUL8 1156 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 CTAGE3PQ8IX95 158 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PIANPQ8IYJ0 282 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PNPLA1Q8N8W4 532 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 OR4L1Q8NH43 312 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 DTX3LQ8TDB6 740 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 CDKL2Q92772 493 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 ALKBH8Q96BT7 664 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 PLEKHG4BQ96PX9 1271 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 CPNE1Q99829 537 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 IL26Q9NPH9 171 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 CD93Q9NPY3 652 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PPANQ9NQ55 473 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 DYRK4Q9NR20 520 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 ZFATQ9P243 1243 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 USP36Q9P275 1121 aaKnown RBP11.27□□□□□ -0.61
SND1-212ENST00000485871 PRDM4Q9UKN5 801 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 FBXO5Q9UKT4 447 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 FZD4Q9ULV1 537 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 PKP3Q9Y446 797 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 FAM186AA6NE01 2351 aa11.27□□□□□ -0.61
SND1-212ENST00000485871 KMT2EQ8IZD2 1858 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 RGSL1A5PLK6 1076 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 CD3EAPO15446 510 aaKnown RBP11.26□□□□□ -0.61
SND1-212ENST00000485871 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.61
SND1-212ENST00000485871 GPR39O43194 453 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 SRP72O76094 671 aaKnown RBP11.26□□□□□ -0.61
SND1-212ENST00000485871 KIAA0754O94854 1291 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 S1PR4O95977 384 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
SND1-212ENST00000485871 DNTTP04053 509 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 C6P13671 934 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 SPAM1P38567 509 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 MSH2P43246 934 aa11.26□□□□□ -0.61
SND1-212ENST00000485871 RPS9P46781 194 aaKnown RBP11.26□□□□□ -0.61
SND1-212ENST00000485871 LEPRP48357 1165 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms