RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	C9orf50	Q5SZB4	431 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	C10orf25	Q5T742	122 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	ACSM2B	Q68CK6	577 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	DDIAS	Q8IXT1	998 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	PELI3	Q8N2H9	469 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	MCU	Q8NE86	351 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	MCPH1	Q8NEM0	835 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	GSDMB	Q8TAX9	411 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	MAP4K1	Q92918	833 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	FBXL8	Q96CD0	374 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	RADIL	Q96JH8	1075 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	SLITRK1	Q96PX8	696 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	SEPT5	Q99719	369 aa	Predicted RBP	4	□□□□□ -1.77
VPS8-223	ENST00000485024	CENPO	Q9BU64	300 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	TASP1	Q9H6P5	420 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	POLR1B	Q9H9Y6	1135 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	KIF9	Q9HAQ2	790 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF304	Q9HCX3	659 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	PNRC2	Q9NPJ4	139 aa	Known RBP	4	□□□□□ -1.77
VPS8-223	ENST00000485024	TAB2	Q9NYJ8	693 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	PLK2	Q9NYY3	685 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	OGFR	Q9NZT2	677 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	SEC63	Q9UGP8	760 aa	Known RBP	4	□□□□□ -1.77
VPS8-223	ENST00000485024	PPIE	Q9UNP9	301 aa	Known RBP	4	□□□□□ -1.77
VPS8-223	ENST00000485024	RAP2C	Q9Y3L5	183 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	SQOR	Q9Y6N5	450 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	MAU2	Q9Y6X3	613 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	PTPRU	Q92729	1446 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	MIA2	Q96PC5	1412 aa		4	□□□□□ -1.77
VPS8-223	ENST00000485024	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4	□□□□□ -1.77
VPS8-223	ENST00000485024	CASZ1	Q86V15	1759 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PXDNL	A1KZ92	1463 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	BAHCC1	Q9P281	2608 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	TRBV5-7	A0A0A0MS05	114 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	KIR2DS5	A0A0G2JLQ3	304 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024		A0A1W2PQF6	199 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	GAGE12J	A6NER3	117 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	LRRC72	A6NJI9	287 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	C2CD4B	A6NLJ0	364 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	AKR1B15	C9JRZ8	316 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	NPIPB11	E5RHQ5	1161 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	KIR2DS3	K7RE56	304 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	SH2B2	O14492	632 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	CTDSP2	O14595	271 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	SLC25A17	O43808	307 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PGM3	O95394	542 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	RPN1	P04843	607 aa	Known RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ADRB2	P07550	413 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PSG1	P11464	419 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	UNG	P13051	313 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	CTPS1	P17812	591 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	TBXAS1	P24557	533 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	SLC15A1	P46059	708 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	NRIP1	P48552	1158 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	STAT2	P52630	851 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	MFAP4	P55083	255 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	F2RL1	P55085	397 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	YPEL5	P62699	121 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	GHRHR	Q02643	423 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	AIMP1	Q12904	312 aa	Known RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PGM5	Q15124	567 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	SOWAHC	Q53LP3	525 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	KDELC2	Q7Z4H8	507 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	LURAP1L	Q8IV03	231 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	DENND6A	Q8IWF6	608 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	MCEMP1	Q8IX19	187 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	CADM3	Q8N126	398 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	NKAIN3	Q8N8D7	197 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	RASSF8	Q8NHQ8	419 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	GABPB2	Q8TAK5	448 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	BICD2	Q8TD16	824 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ATOH1	Q92858	354 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ZMAT2	Q96NC0	199 aa	Known RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	WDFY2	Q96P53	400 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	TMEM47	Q9BQJ4	181 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PIMREG	Q9BSJ6	248 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	APOL6	Q9BWW8	343 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PDZD7	Q9H5P4	517 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ERVMER34-1	Q9H9K5	563 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	RANGRF	Q9HD47	186 aa	Predicted RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	PDE7B	Q9NP56	450 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	SH3GLB2	Q9NR46	395 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ABI3	Q9P2A4	366 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	AGO2	Q9UKV8	859 aa	Known RBP	3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	ZNF711	Q9Y462	761 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	RREB1	Q92766	1687 aa		3.99	□□□□□ -1.77
VPS8-223	ENST00000485024	NUP188	Q5SRE5	1749 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	FAM237A	A0A1B0GTK4	181 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024		A8MV72	311 aa	Predicted RBP	3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	KLRF2	D3W0D1	207 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	SLC28A2	O43868	658 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	UGDH	O60701	494 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	WNT1	P04628	370 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	HIST1H2AB	P04908	130 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	TFPI	P10646	304 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	GABRB1	P18505	474 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	HIST1H2AD	P20671	130 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	CHAT	P28329	748 aa		3.98	□□□□□ -1.77
VPS8-223	ENST00000485024	HOXD9	P28356	352 aa	Predicted RBP	3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms