RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ALDH4A1P30038 563 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 ACTR1BP42025 376 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 SSR1P43307 286 aaKnown RBP11.39□□□□□ -0.59
SCFD1-206ENST00000484733 FASLGP48023 281 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 MAPK10P53779 464 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 ACTR1AP61163 376 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GPLD1P80108 840 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 NIPAL4Q0D2K0 466 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 TGIF1Q15583 401 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 LINC00303Q3SY05 128 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 AMZ1Q400G9 498 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 MANEAQ5SRI9 462 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 ZFAND4Q86XD8 727 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 PQLC3Q8N755 202 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 SCAMP4Q969E2 229 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 WDR24Q96S15 920 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 NUDT22Q9BRQ3 303 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 RMI1Q9H9A7 625 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 PCDH9Q9HC56 1237 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 GOLGA6AQ9NYA3 693 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 PDP2Q9P2J9 529 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 CD84Q9UIB8 345 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 CHKBQ9Y259 395 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 TMEM98Q9Y2Y6 226 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 PLEKHM1Q9Y4G2 1056 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 PCDHB11Q9Y5F2 797 aa11.39□□□□□ -0.59
SCFD1-206ENST00000484733 DNAJC6O75061 913 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 DOK6Q6PKX4 331 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 VSIG1Q86XK7 387 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 GALNT13Q8IUC8 556 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 CCDC13Q8IYE1 715 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 PATE1Q8WXA2 126 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 SMIM14Q96QK8 99 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 AGAP2Q99490 1192 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 RIOK2Q9BVS4 552 aaKnown RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 SUDS3Q9H7L9 328 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 CTTNBP2NLQ9P2B4 639 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 CNOT6Q9ULM6 557 aaKnown RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.593e-6■□□□□ 10.3
SCFD1-206ENST00000484733 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 A0A0U1RQS6 177 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 HLA-DQB2P05538 268 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 THRAP10827 490 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 TAS2R40P59535 323 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 BIRC2Q13490 618 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 HENMT1Q5T8I9 393 aaKnown RBP11.38□□□□□ -0.59
SCFD1-206ENST00000484733 TMEM71Q6P5X7 295 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 SFRP1Q8N474 314 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 EXD3Q8N9H8 876 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 DDA1Q9BW61 102 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 RDH14Q9HBH5 336 aa11.38□□□□□ -0.59
SCFD1-206ENST00000484733 SYCE3A1L190 88 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 B4E171 279 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 GOLGA6L19H0YKK7 550 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CLDN7O95471 211 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 MMP2P08253 660 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 FGF3P11487 239 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CCL4P13236 92 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 KDELR1P24390 212 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 TSPAN7P41732 249 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SPINT3P49223 89 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CLCNKAP51800 687 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 IFI35P80217 286 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SLC18A3Q16572 532 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 QPCTQ16769 361 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 ASTE1Q2TB18 679 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 AGBL5Q8NDL9 886 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CCDC112Q8NEF3 446 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CTNNBL1Q8WYA6 563 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 RNF157Q96PX1 679 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 KCNK4Q9NYG8 393 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 DTLQ9NZJ0 730 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 PKD2L2Q9NZM6 624 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 IFNKQ9P0W0 207 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 ZFC3H1O60293 1989 aaKnown RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 TMEM253P0C7T8 217 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SFTPCP11686 197 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 CASP14P31944 242 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 GBE1Q04446 702 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 PPIDQ08752 370 aaKnown RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SRSF6Q13247 344 aaKnown RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SLC14A2Q15849 920 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 LPCAT1Q8NF37 534 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SH3KBP1Q96B97 665 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 MLPHQ9BV36 600 aaPredicted RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 FAM83DQ9H4H8 585 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SARS2Q9NP81 518 aaKnown RBP11.37□□□□□ -0.59
SCFD1-206ENST00000484733 PCDHGA4Q9Y5G9 962 aa11.37□□□□□ -0.59
SCFD1-206ENST00000484733 SSU72P8A0A1W2PR75 194 aa11.36□□□□□ -0.59
SCFD1-206ENST00000484733 ANKRD66B4E2M5 251 aa11.36□□□□□ -0.59
SCFD1-206ENST00000484733 STMND1H3BQB6 276 aa11.36□□□□□ -0.59
SCFD1-206ENST00000484733 SLC2A4P14672 509 aa11.36□□□□□ -0.59
SCFD1-206ENST00000484733 CSF2RBP32927 897 aa11.36□□□□□ -0.59
SCFD1-206ENST00000484733 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms