RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 CCHCR1Q8TD31 782 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 SLC39A7Q92504 469 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 OLFM3Q96PB7 478 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 CMKLR1Q99788 373 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 MLPHQ9BV36 600 aaPredicted RBP19.74■□□□□ 0.75
HPS4-213ENST00000483631 MAK16Q9BXY0 300 aaKnown RBP19.74■□□□□ 0.75
HPS4-213ENST00000483631 FOXP3Q9BZS1 431 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 DDX56Q9NY93 547 aaKnown RBP19.74■□□□□ 0.75
HPS4-213ENST00000483631 PKD2L2Q9NZM6 624 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 CD84Q9UIB8 345 aa19.74■□□□□ 0.75
HPS4-213ENST00000483631 MGAQ8IWI9 3026 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 PMS2P1A4D2B8 440 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 RHPN2P1A8MT19 583 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 KCNK1O00180 336 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 APOL1O14791 398 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 PPP1R12AO14974 1030 aaPredicted RBP19.73■□□□□ 0.75
HPS4-213ENST00000483631 CLDN7O95471 211 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 MMP2P08253 660 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 JMJD7P0C870 316 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 AK4P27144 223 aaPredicted RBP19.73■□□□□ 0.75
HPS4-213ENST00000483631 POLD2P49005 469 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 SPINT3P49223 89 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 QPCTQ16769 361 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 HENMT1Q5T8I9 393 aaKnown RBP19.73■□□□□ 0.75
HPS4-213ENST00000483631 SLC30A9Q6PML9 568 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 RFLNAQ6ZTI6 216 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 PIM3Q86V86 326 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 SFTPA2Q8IWL1 248 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 RHOT1Q8IXI2 618 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 NAGSQ8N159 534 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 CNTD1Q8N815 330 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 DPYSL5Q9BPU6 564 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 RIOK2Q9BVS4 552 aaKnown RBP19.73■□□□□ 0.75
HPS4-213ENST00000483631 RMI1Q9H9A7 625 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 SPTLC3Q9NUV7 552 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 LOXL2Q9Y4K0 774 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 ST14Q9Y5Y6 855 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 COL6A6A6NMZ7 2263 aa19.73■□□□□ 0.75
HPS4-213ENST00000483631 C1orf232A0A0U1RR37 186 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 HGSO14964 777 aaPredicted RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 B4GAT1O43505 415 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 ECEL1O95672 775 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 SLC5A2P31639 672 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 ACTR1BP42025 376 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 CD86P42081 329 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 MAZP56270 477 aaKnown RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 ACTR1AP61163 376 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 ZBTB17Q13105 803 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 CLN3Q13286 438 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 BZW1Q7L1Q6 419 aaKnown RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 GALNT13Q8IUC8 556 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 PTCD2Q8WV60 388 aaKnown RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 IMP4Q96G21 291 aaKnown RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 SMIM14Q96QK8 99 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 AKAP7Q9P0M2 348 aaPredicted RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 NFKBIL1Q9UBC1 381 aaPredicted RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 ATXN7L1Q9ULK2 861 aaPredicted RBP19.72■□□□□ 0.75
HPS4-213ENST00000483631 HEY1Q9Y5J3 304 aa19.72■□□□□ 0.75
HPS4-213ENST00000483631 A0A0U1RQS6 177 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 K7ENP7 123 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 FASLGP48023 281 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 NR2C2P49116 596 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 HADHBP55084 474 aaKnown RBP19.71■□□□□ 0.75
HPS4-213ENST00000483631 AP1B1Q10567 949 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 BIRC2Q13490 618 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 TRA2AQ13595 282 aaKnown RBP eCLIP19.71■□□□□ 0.75
HPS4-213ENST00000483631 MAP9Q49MG5 647 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 ODF2Q5BJF6 829 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 INO80CQ6PI98 192 aaPredicted RBP19.71■□□□□ 0.75
HPS4-213ENST00000483631 DOK6Q6PKX4 331 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 NT5DC3Q86UY8 548 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.71■□□□□ 0.75
HPS4-213ENST00000483631 TADA1Q96BN2 335 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 WDR24Q96S15 920 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 SRPK1Q96SB4 655 aaKnown RBP19.71■□□□□ 0.75
HPS4-213ENST00000483631 AGAP2Q99490 1192 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 SLC25A51Q9H1U9 297 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 FAM83DQ9H4H8 585 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 SUDS3Q9H7L9 328 aaPredicted RBP19.71■□□□□ 0.75
HPS4-213ENST00000483631 CPNE5Q9HCH3 593 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 RAD18Q9NS91 495 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.71■□□□□ 0.75
HPS4-213ENST00000483631 TMEM98Q9Y2Y6 226 aa19.71■□□□□ 0.75
HPS4-213ENST00000483631 AKR1B15C9JRZ8 316 aaPredicted RBP19.7■□□□□ 0.74
HPS4-213ENST00000483631 DNAJC6O75061 913 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 KRT1P04264 644 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 CD82P27701 267 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 DCDC1P59894 354 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 GPLD1P80108 840 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 C19orf57Q0VDD7 668 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 TBX2Q13207 712 aaPredicted RBP19.7■□□□□ 0.74
HPS4-213ENST00000483631 TAZQ16635 292 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 PDPK2PQ6A1A2 396 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 LRRN4Q8WUT4 740 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 TRIB3Q96RU7 358 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 MAGEE1Q9HCI5 957 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 PISDQ9UG56 409 aa19.7■□□□□ 0.74
HPS4-213ENST00000483631 CNOT6Q9ULM6 557 aaKnown RBP19.7■□□□□ 0.74
HPS4-213ENST00000483631 GPR89AB7ZAQ6 455 aa19.69■□□□□ 0.74
HPS4-213ENST00000483631 PSTPIP1O43586 416 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms