RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 K7ERQ8 282 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 PRMT5O14744 637 aaPredicted RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 SMAD6O43541 496 aaKnown RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 ZBTB14O43829 449 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 KERAO60938 352 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 POP4O95707 220 aaKnown RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 THRAP10827 490 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 SRCP12931 536 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ZNF7P17097 686 aaPredicted RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 RPS3P23396 243 aaKnown RBP eCLIP11.87□□□□□ -0.518e-8■■□□□ 11.4
SND1-210ENST00000483503 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 IL2P60568 153 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 HERVK_113P63132 956 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 XIAPP98170 497 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 TIAL1Q01085 375 aaKnown RBP eCLIP11.87□□□□□ -0.51
SND1-210ENST00000483503 PEX6Q13608 980 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 HERC3Q15034 1050 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 MYLK3Q32MK0 819 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 GPR33Q49SQ1 333 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ZNF678Q5SXM1 525 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 C22orf39Q6P5X5 142 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 TXNDC11Q6PKC3 985 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ATG14Q6ZNE5 492 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 USP45Q70EL2 814 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 LYSMD3Q7Z3D4 306 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 SNX20Q7Z614 316 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 PIM3Q86V86 326 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 CPSF7Q8N684 471 aaKnown RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 KDM1BQ8NB78 822 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ACTRT2Q8TDY3 377 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 IRF7Q92985 503 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ZNF641Q96N77 438 aaPredicted RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 LYSMD1Q96S90 227 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 MIPEPQ99797 713 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 BBS2Q9BXC9 721 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 ERVK-6Q9BXR3 956 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 HCFC1R1Q9NWW0 138 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 RNF112Q9ULX5 631 aa11.87□□□□□ -0.51
SND1-210ENST00000483503 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
SND1-210ENST00000483503 CENPFP49454 3210 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 C1orf232A0A0U1RR37 186 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 E9PBE3 544 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 KLHL41O60662 606 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 MOSPD3O75425 235 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PABPC1P11940 636 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 GFAPP14136 432 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 CTPS1P17812 591 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 WEE1P30291 646 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 CCR2P41597 374 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 POLR2LP62875 67 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 IRX1P78414 480 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 KLF10Q13118 480 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 ZNF77Q15935 545 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 CRY1Q16526 586 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 LSM12Q3MHD2 195 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 VWA5B1Q5TIE3 1220 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 NXNQ6DKJ4 435 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PAQR3Q6TCH7 311 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 NET1Q7Z628 596 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 SCUBE1Q8IWY4 988 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PIANPQ8IYJ0 282 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 RBFAQ8N0V3 343 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 RBM15BQ8NDT2 890 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 GRIN3AQ8TCU5 1115 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 MAPK15Q8TD08 544 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PTERQ96BW5 349 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 TCEAL4Q96EI5 215 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 MAELQ96JY0 434 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 BIRC8Q96P09 236 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 ATOH8Q96SQ7 321 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 GPR21Q99679 349 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 LBHD1Q9BQE6 289 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 RTKNQ9BST9 563 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 NUF2Q9BZD4 464 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 UNKQ9C0B0 810 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 CLPBQ9H078 707 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 GSTO2Q9H4Y5 243 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 SUV39H2Q9H5I1 410 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 BPIFA1Q9NP55 256 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 MARK1Q9P0L2 795 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 HECAQ9UBI9 543 aaPredicted RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 GNPTGQ9UJJ9 305 aa11.86□□□□□ -0.51
SND1-210ENST00000483503 INTS6Q9UL03 887 aaKnown RBP11.86□□□□□ -0.51
SND1-210ENST00000483503 SLC8A2Q9UPR5 921 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms