RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RASA4O43374 803 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 SLC26A4O43511 780 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 TSPAN6O43657 245 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 IPO13O94829 963 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 TOXO94900 526 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 PRPF6O94906 941 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 PRNPP04156 253 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 FGF5P12034 268 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 SRCP12931 536 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 UGT1A4P22310 534 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 AK4P27144 223 aaPredicted RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 HTR1BP28222 390 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 MCM7P33993 719 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 SEPHS1P49903 392 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 CASP6P55212 293 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 DCAF7P61962 342 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 YWHAGP61981 247 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHD6-209ENST00000482596 TNNC1P63316 161 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 PCBP2Q15366 365 aaKnown RBP eCLIP6.43□□□□□ -1.384e-10■■■■■ 31.6
CHD6-209ENST00000482596 KLHL40Q2TBA0 621 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 LRRC73Q5JTD7 316 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 SLFN12LQ6IEE8 588 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 PWWP2BQ6NUJ5 590 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 WDR74Q6RFH5 385 aaPredicted RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 C3P1Q6ZMU1 363 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 PCGF5Q86SE9 256 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 CIR1Q86X95 450 aaPredicted RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 CBARPQ8N350 705 aaPredicted RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 FBXL16Q8N461 479 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 OR52K2Q8NGK3 314 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 SNX29Q8TEQ0 813 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 NOC3LQ8WTT2 800 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 WASF1Q92558 559 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 EDEM1Q92611 657 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 LARP4BQ92615 738 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 TMEM125Q96AQ2 219 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 FIZ1Q96SL8 496 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 TIPINQ9BVW5 301 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 TNKS2Q9H2K2 1166 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 DDX56Q9NY93 547 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 TAAR2Q9P1P5 351 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 LARSQ9P2J5 1176 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 FBXO9Q9UK97 447 aaPredicted RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 TCFL5Q9UL49 500 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 COQ6Q9Y2Z9 468 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 HBS1LQ9Y450 684 aaKnown RBP6.43□□□□□ -1.38
CHD6-209ENST00000482596 CYP46A1Q9Y6A2 500 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 PCM1Q15154 2024 aa6.43□□□□□ -1.38
CHD6-209ENST00000482596 ABCA1O95477 2261 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TRBV23OR9-2A0A075B6M9 112 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TMEM110-MUSTN1A8MSY1 372 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TOR1BO14657 336 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 SMAD6O43541 496 aaKnown RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 GHRHP01286 108 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 S100BP04271 92 aaPredicted RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 FAM163BP0C2L3 166 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 PYGMP11217 842 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 CCNB1P14635 433 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 ITIH2P19823 946 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 RPS6KB1P23443 525 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 L1CAMP32004 1257 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 SOX18P35713 384 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 GFERP55789 205 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 SULT2A1Q06520 285 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 SNTB1Q13884 538 aaKnown RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 DOC2BQ14184 412 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 IL11RAQ14626 422 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 WSCD2Q2TBF2 565 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 MS4A13Q5J8X5 152 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 UBAP2Q5T6F2 1119 aaKnown RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 PRAMEF17Q5VTA0 474 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 SCARA5Q6ZMJ2 495 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 RUFY3Q7L099 469 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 BHLHA9Q7RTU4 235 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 CXorf67Q86X51 503 aaPredicted RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 OR10G6Q8NH81 332 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TAF4BQ92750 862 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 RNF34Q969K3 372 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 ALG14Q96F25 216 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TNIP3Q96KP6 325 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 NSUN5Q96P11 429 aaKnown RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 FEM1AQ9BSK4 669 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 AMBRA1Q9C0C7 1298 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 CHST8Q9H2A9 424 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 ZSCAN16Q9H4T2 348 aaPredicted RBP6.42□□□□□ -1.38
CHD6-209ENST00000482596 LRTM1Q9HBL6 345 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 IL36AQ9UHA7 158 aa6.42□□□□□ -1.38
CHD6-209ENST00000482596 TYW5A2RUC4 315 aaKnown RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 TRIM49BA6NDI0 452 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 ADAM10O14672 748 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 SPTLC2O15270 562 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 ARHGEF9O43307 516 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 GADD45BO75293 160 aaPredicted RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 ENDOD1O94919 500 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 IGLV3-27P01718 113 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 TNNC2P02585 160 aa6.41□□□□□ -1.38
CHD6-209ENST00000482596 HSP90AA1P07900 732 aaKnown RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 UNGP13051 313 aaPredicted RBP6.41□□□□□ -1.38
CHD6-209ENST00000482596 CD53P19397 219 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms