RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 LRRC40Q9H9A6 602 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ATP13A1Q9HD20 1204 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ABCC13Q9NSE7 274 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 BFARQ9NZS9 450 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TXNDC16Q9P2K2 825 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 AASSQ9UDR5 926 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 DCDC2Q9UHG0 476 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 GRID1Q9ULK0 1009 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 SORCS3Q9UPU3 1222 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 PLLPQ9Y342 182 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 ST14Q9Y5Y6 855 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 MAD1L1Q9Y6D9 718 aa7.79□□□□□ -1.16
SNX13-208ENST00000482558 TRIM49D1C9J1S8 452 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 H0Y8X5 98 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 TMEM189-UBE2V1I3L0A0 370 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 TRAFD1O14545 582 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 AHCYL1O43865 530 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 METTL18O95568 372 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 AP2A1O95782 977 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CHRNA1P02708 482 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 SRFP11831 508 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 MYF5P13349 255 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 NQO1P15559 274 aaKnown RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 ETV4P43268 484 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 MAN2A2P49641 1150 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CDK7P50613 346 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CLCNKBP51801 687 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 MGAT5Q09328 741 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 GALNT2Q10471 571 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 AP1B1Q10567 949 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 SMARCB1Q12824 385 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 SLC10A2Q12908 348 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 CRHR2Q13324 411 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 SLC1A5Q15758 541 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 ZKSCAN8Q15776 578 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 ZNF618Q5T7W0 954 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 GRTP1Q5TC63 336 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 FAM91A1Q658Y4 838 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 NAPEPLDQ6IQ20 393 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CRTC3Q6UUV7 619 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 LRRTM4Q86VH4 590 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 IGDCC3Q8IVU1 814 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CCDC117Q8IWD4 279 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 NRSN1Q8IZ57 195 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 DCP1BQ8IZD4 617 aaKnown RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 GALNT15Q8N3T1 639 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 ZNF655Q8N720 491 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 ZNF610Q8N9Z0 462 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CCNYQ8ND76 341 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 KLHDC9Q8NEP7 349 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 URGCPQ8TCY9 931 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CLEC4CQ8WTT0 213 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 FATE1Q969F0 183 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 HSPA12BQ96MM6 686 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 TSGA13Q96PP4 275 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CPNE1Q99829 537 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 SMOQ99835 787 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 FTHL17Q9BXU8 183 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 ZDHHC5Q9C0B5 715 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CXCL16Q9H2A7 254 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CATSPERBQ9H7T0 1116 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 WDR6Q9NNW5 1121 aaKnown RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 XPNPEP3Q9NQH7 507 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 ARHGEF3Q9NR81 526 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 COMMD8Q9NX08 183 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 DDIT4Q9NX09 232 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 KLHL8Q9P2G9 620 aaPredicted RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 MID2Q9UJV3 735 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 PADI3Q9ULW8 664 aa7.78□□□□□ -1.16
SNX13-208ENST00000482558 AAR2Q9Y312 384 aaKnown RBP7.78□□□□□ -1.16
SNX13-208ENST00000482558 CASP8AP2Q9UKL3 1982 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 FAM237BA0A1B0GVD1 139 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 POM121BA6NF01 834 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 HHLA1C9JL84 531 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 MASP2O00187 686 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 GSTA4O15217 222 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 MFSD11O43934 449 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ATP2C2O75185 946 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 GLRA3O75311 464 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 BANF1O75531 89 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ANXA9O76027 345 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 B3GAT3O94766 335 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 USP1O94782 785 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 C1QAP02745 245 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ALDH2P05091 517 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 GSNP06396 782 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ERCC2P18074 760 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 CCNCP24863 283 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 ADRA1DP25100 572 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 SPRP35270 261 aaPredicted RBP7.77□□□□□ -1.17
SNX13-208ENST00000482558 THPOP40225 353 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 IL12RB1P42701 662 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 PSMC4P43686 418 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 SCNN1GP51170 649 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 MNAT1P51948 309 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 PRKAA2P54646 552 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 C1QTNF8P60827 252 aa7.77□□□□□ -1.17
SNX13-208ENST00000482558 NCALDP61601 193 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 289.4 ms