RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 NFATC2Q13469 925 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 PEX6Q13608 980 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 HENMT1Q5T8I9 393 aaKnown RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 ZNF470Q6ECI4 717 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 TMEM92Q6UXU6 159 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 PTAR1Q7Z6K3 402 aaPredicted RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 STRA8Q7Z7C7 330 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 TSPAN33Q86UF1 283 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 ZC3HC1Q86WB0 502 aaKnown RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 OR2W6PQ8NHA6 318 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 ZNF398Q8TD17 642 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 EPS8L3Q8TE67 593 aaKnown RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 ISL2Q96A47 359 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 DTD2Q96FN9 168 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 TSPAN17Q96FV3 270 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 ATP6V1G3Q96LB4 118 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 GPR22Q99680 433 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 TRIM56Q9BRZ2 755 aaKnown RBP10.12□□□□□ -0.79
USP39-215ENST00000481409 IL26Q9NPH9 171 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 SMYD2Q9NRG4 433 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 EBF1Q9UH73 591 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 MUTYHQ9UIF7 546 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 FKBPLQ9UIM3 349 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 GGT7Q9UJ14 662 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 KCTD3Q9Y597 815 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 PCDHB1Q9Y5F3 818 aa10.12□□□□□ -0.79
USP39-215ENST00000481409 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CCDC163A0A0D9SF12 145 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CCDC189A1A4V9 331 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CFAP99D6REC4 459 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 SPINT1O43278 529 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 DCXO43602 365 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 LZTS3O60299 673 aaPredicted RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 APBB3O95704 486 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 SYF2O95926 243 aaKnown RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 S1PR4O95977 384 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 AHSGP02765 367 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ESR1P03372 595 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ITGA2BP08514 1039 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 GSTM1P09488 218 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 RALBP11234 206 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 C6P13671 934 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ZNF7P17097 686 aaPredicted RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 GABRG2P18507 467 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 KRT15P19012 456 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 NDUFV2P19404 249 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ACRV1P26436 265 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 SLC26A3P40879 764 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 SLC1A2P43004 574 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CCR3P51677 355 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 SLC18A1P54219 525 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ADPRHP54922 357 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 TMPRSS15P98073 1019 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 POU4F1Q01851 419 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 GSTM4Q03013 218 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ACOX1Q15067 660 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ZRANB3Q5FWF4 1079 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 LDLRAP1Q5SW96 308 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 UBAP2Q5T6F2 1119 aaKnown RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 FAM45BPQ6NSW5 357 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 UGT3A1Q6NUS8 523 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 TRIM67Q6ZTA4 783 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 TRIM69Q86WT6 500 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 RBFAQ8N0V3 343 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ARFGAP2Q8N6H7 521 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 GPR26Q8NDV2 337 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 DENND6BQ8NEG7 585 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 TSTD1Q8NFU3 115 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 OR2T34Q8NGX1 318 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 FAM45AQ8TCE6 357 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 GANCQ8TET4 914 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 TLCD1Q96CP7 247 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 NUS1Q96E22 293 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 VPS39Q96JC1 886 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 LENG8Q96PV6 779 aaPredicted RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 AGAP2Q99490 1192 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 C1QTNF2Q9BXJ5 285 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ZCCHC2Q9C0B9 1178 aaKnown RBP10.11□□□□□ -0.79
USP39-215ENST00000481409 BTBD1Q9H0C5 482 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CCDC68Q9H2F9 335 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 ASB8Q9H765 288 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 POPDC3Q9HBV1 291 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 BPIFA1Q9NP55 256 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 FAM53CQ9NYF3 392 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 CRLS1Q9UJA2 301 aa10.11□□□□□ -0.79
USP39-215ENST00000481409 IGLV3-16A0A075B6K0 115 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 CCDC78A2IDD5 438 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 GPR89AB7ZAQ6 455 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 STK25O00506 426 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 GAPDHSO14556 408 aaPredicted RBP10.1□□□□□ -0.79
USP39-215ENST00000481409 BUD23O43709 281 aaKnown RBP10.1□□□□□ -0.79
USP39-215ENST00000481409 RECQL5O94762 991 aaPredicted RBP10.1□□□□□ -0.79
USP39-215ENST00000481409 AP2A2O94973 939 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 PCDH8O95206 1070 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 SLC4A1P02730 911 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 MT-ND3P03897 115 aa10.1□□□□□ -0.79
USP39-215ENST00000481409 MPOP05164 745 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms