RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 FOXR1Q6PIV2 292 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CCDC81Q6ZN84 652 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 GALNT13Q8IUC8 556 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 NAGSQ8N159 534 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 AVL9Q8NBF6 648 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CCDC42Q96M95 316 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CCNL2Q96S94 520 aaPredicted RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SRPK1Q96SB4 655 aaKnown RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CPNE5Q9HCH3 593 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 RAD18Q9NS91 495 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SPATS2LQ9NUQ6 558 aaKnown RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 PKD2L2Q9NZM6 624 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 SEPT10Q9P0V9 454 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 NFKBIL1Q9UBC1 381 aaPredicted RBP12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 CHKBQ9Y259 395 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 TTLL3Q9Y4R7 772 aa12.07□□□□□ -0.48
SQSTM1-207ENST00000481335 C1orf232A0A0U1RR37 186 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 ANKRD66B4E2M5 251 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 MFAP3LO75121 409 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 ECEL1O95672 775 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 FUCA1P04066 466 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC2A4P14672 509 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 AK4P27144 223 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 ACTR1BP42025 376 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 DCDC1P59894 354 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 ACTR1AP61163 376 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 PDK1Q15118 436 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 HENMT1Q5T8I9 393 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 ARHGAP40Q5TG30 622 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 TMEM164Q5U3C3 297 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 PDPK2PQ6A1A2 396 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC30A9Q6PML9 568 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 XKR5Q6UX68 686 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 BZW1Q7L1Q6 419 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 VSTM4Q8IW00 320 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 PLD5Q8N7P1 536 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 Q8N9G6 341 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 CCNYQ8ND76 341 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC35G2Q8TBE7 412 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 OLFM3Q96PB7 478 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 MLPHQ9BV36 600 aaPredicted RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 PACSIN1Q9BY11 444 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 STN1Q9H668 368 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 DDX56Q9NY93 547 aaKnown RBP12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 CD84Q9UIB8 345 aa12.06□□□□□ -0.48
SQSTM1-207ENST00000481335 PMS2P1A4D2B8 440 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 APOL1O14791 398 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 CASC3O15234 703 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 MAP3K6O95382 1288 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 SPINT3P49223 89 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 MAZP56270 477 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 CFHR1Q03591 330 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 SLC10A2Q12908 348 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 MESDQ14696 234 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 TAF1BQ53T94 588 aaPredicted RBP12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 ODF2Q5BJF6 829 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 JAMLQ86YT9 394 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 CCDC112Q8NEF3 446 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 LPCAT1Q8NF37 534 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 OR4D9Q8NGE8 314 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 RAPGEF5Q92565 580 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 TTC9Q92623 222 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 SCAMP4Q969E2 229 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 HERPUD2Q9BSE4 406 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 FAM83DQ9H4H8 585 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 PISDQ9UG56 409 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 ZNF462Q96JM2 2506 aa12.05□□□□□ -0.48
SQSTM1-207ENST00000481335 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 C3orf70A6NLC5 250 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 OR5K4A6NMS3 321 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 KCNK1O00180 336 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 B4GAT1O43505 415 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 DNAJC6O75061 913 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 C1QL1O75973 258 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 CLDN7O95471 211 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 JCHAINP01591 159 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 MMP2P08253 660 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 ALDH4A1P30038 563 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 CD86P42081 329 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 POLD2P49005 469 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 NR2C2P49116 596 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 CLCNKAP51800 687 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 LIMK2P53671 638 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 HADHBP55084 474 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 IHHQ14623 411 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 QPCTQ16769 361 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 PHF19Q5T6S3 580 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 DOK6Q6PKX4 331 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 PCSK4Q6UW60 755 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 NT5DC3Q86UY8 548 aa12.04□□□□□ -0.48
SQSTM1-207ENST00000481335 SFTPA2Q8IWL1 248 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms