RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 TRMT13Q9NUP7 481 aaKnown RBP9.52□□□□□ -0.88
VEGFA-212ENST00000480614 GPC6Q9Y625 555 aaPredicted RBP9.52□□□□□ -0.88
VEGFA-212ENST00000480614 PIK3R6Q5UE93 754 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 FOXR2Q6PJQ5 311 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 RAB43Q86YS6 212 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 GPC2Q8N158 579 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 CALML5Q9NZT1 146 aa9.52□□□□□ -0.88
VEGFA-212ENST00000480614 PER2O15055 1255 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF208O43345 1280 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 IL1BP01584 269 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 MATKP42679 507 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 ABL2P42684 1182 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 HBS1LQ9Y450 684 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 NCOR1O75376 2440 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 GRM6O15303 877 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 UBXN7O94888 489 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 NUDT17P0C025 328 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SMIM10L2AP0DMW4 78 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SMIM10L2BP0DMW5 78 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 UBA1P22314 1058 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 CASP5P51878 434 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 MED28Q9H204 178 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 IFT80Q9P2H3 777 aaPredicted RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 H0YJX3 145 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 PAPSS2O95340 614 aaPredicted RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 TFEBP19484 476 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 CXCR3P49682 368 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 PLET1Q6UQ28 207 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 DENND1CQ8IV53 801 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SLC9A6Q92581 669 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 RNF31Q96EP0 1072 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 ADAMDEC1O15204 470 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 PLIN3O60664 434 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 GSTT2BP0CG30 244 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 DNASE1L1P49184 302 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 IQCMA0A1B0GVH7 501 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 C5orf60A6NFR6 353 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 TCEA3O75764 348 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 KCNA5P22460 613 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SSR2P43308 183 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 LIPEQ05469 1076 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 OR2T34Q8NGX1 318 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 OR2T3Q8NH03 318 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 TSEN15Q8WW01 171 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 FATE1Q969F0 183 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 ABCG4Q9H172 646 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 LRRC19Q9H756 370 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 FFAR3O14843 346 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 GPR42O15529 346 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 EIF5AP63241 154 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 NUP54Q7Z3B4 507 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 DNAJB14Q8TBM8 379 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 IPO13O94829 963 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 SAGP10523 405 aaPredicted RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 CDH8P55286 799 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 UNC5AQ6ZN44 842 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 ZNF554Q86TJ5 538 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 LRRC52Q8N7C0 313 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 OR5T3Q8NGG3 340 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 PLEKHA1Q9HB21 404 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 PTPRHQ9HD43 1115 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 MAN2B2Q9Y2E5 1009 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 CASKO14936 926 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 BAP1Q92560 729 aa9.52□□□□□ -0.89
VEGFA-212ENST00000480614 MTFMTQ96DP5 389 aaKnown RBP9.52□□□□□ -0.89
VEGFA-212ENST00000480614 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SCN1BQ07699 218 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FAM91A1Q658Y4 838 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 ATG14Q6ZNE5 492 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DET1Q7L5Y6 550 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 HCN3Q9P1Z3 774 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 TULP2O00295 520 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 PDCD5O14737 125 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SLITRK3O94933 977 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CTSKP43235 329 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 ZIK1Q3SY52 487 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 NOMO2Q5JPE7 1267 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 TPGS1Q6ZTW0 290 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 MON1AQ86VX9 555 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FCGR1BQ92637 280 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 MGME1Q9BQP7 344 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CLIC5Q9NZA1 410 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 PRDX6P30041 224 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 SAMD14Q8IZD0 417 aaPredicted RBP9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FIBCD1Q8N539 461 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CCDC54Q8NEL0 328 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 FPGTO14772 594 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CCNE2O96020 404 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 DNTTP04053 509 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 CLUP10909 449 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 ITIH1P19827 911 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 AMIGO1Q86WK6 493 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 RIOX2Q8IUF8 465 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 UBR7Q8N806 425 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
VEGFA-212ENST00000480614 PAK6Q9NQU5 681 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms