RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 ZNF148Q9UQR1 794 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 LIPGQ9Y5X9 500 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 MROH1Q8NDA8 1641 aa7.47□□□□□ -1.21
GAPVD1-217ENST00000479511 DHX29Q7Z478 1369 aaKnown RBP7.46□□□□□ -1.21
GAPVD1-217ENST00000479511 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.21
GAPVD1-217ENST00000479511 PTCH1Q13635 1447 aa7.46□□□□□ -1.21
GAPVD1-217ENST00000479511 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 CCDC151A5D8V7 595 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 H7C1Q1 480 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 DNM1LO00429 736 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 WNT1P04628 370 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 THEGLP0DJG4 465 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 STMN1P16949 149 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 PRKCIP41743 596 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 RAB28P51157 221 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 GRSF1Q12849 480 aaKnown RBP eCLIP7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 KRT24Q2M2I5 525 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 C2orf68Q2NKX9 166 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 USP39Q53GS9 565 aaKnown RBP7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 ESCO2Q56NI9 601 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 ADIPOR2Q86V24 386 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 SIX6OS1Q8N1H7 587 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 ZBTB2Q8N680 514 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 RBM15BQ8NDT2 890 aaKnown RBP7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 CMASQ8NFW8 434 aaPredicted RBP7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 OR8K5Q8NH50 307 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 CFAP61Q8NHU2 1237 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 HAS1Q92839 578 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 SNAPC3Q92966 411 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 REPS1Q96D71 796 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 PI4K2AQ9BTU6 479 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 PCED1AQ9H1Q7 454 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 NRIP3Q9NQ35 241 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 SLIT1O75093 1534 aa7.46□□□□□ -1.22
GAPVD1-217ENST00000479511 TRBV5-7A0A0A0MS05 114 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 SLC22A23A1A5C7 686 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 ATP2A1O14983 1001 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 GPC4O75487 556 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 JRKO75564 520 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 PSMA3P25788 255 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 ADRA1BP35368 520 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 AMPHP49418 695 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 NAE1Q13564 534 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 PTK6Q13882 451 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 LEXMQ3ZCV2 418 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 DNAJC21Q5F1R6 531 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 NHSL2Q5HYW2 709 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 PRAMEF19Q5SWL8 479 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 MRGPREQ86SM8 312 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 CCAR2Q8N163 923 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 CORO2AQ92828 525 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 KAT2BQ92831 832 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 FBXL8Q96CD0 374 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 SLC41A2Q96JW4 573 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 EGLN2Q96KS0 407 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 SLITRK1Q96PX8 696 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 MGME1Q9BQP7 344 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 NDRG3Q9UGV2 375 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 PA2G4Q9UQ80 394 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 KLHL20Q9Y2M5 609 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 CLIC4Q9Y696 253 aa7.45□□□□□ -1.22
GAPVD1-217ENST00000479511 EDDM13A0A1B0GTR0 161 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 RNMTO43148 476 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 PRPF4O43172 522 aaKnown RBP eCLIP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SLC22A3O75751 556 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 ZWINTO95229 277 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 TRUB2O95900 331 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SUPT20HL2P0C7V6 817 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 PRLRP16471 622 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 GPR143P51810 404 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 BMXP51813 675 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CDH13P55290 713 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 YPEL5P62699 121 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 ADORA2A-AS1P86434 159 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SNAPC1Q16533 368 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 TYSND1Q2T9J0 566 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SUPT20HL1Q3ZLR7 823 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CBWD6Q4V339 395 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CBWD3Q5JTY5 395 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 AAGABQ6PD74 315 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 ARID3BQ8IVW6 561 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 MCEMP1Q8IX19 187 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 IQUBQ8NA54 791 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 MCPH1Q8NEM0 835 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 WIPF2Q8TF74 440 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 RNF183Q96D59 192 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 TBC1D31Q96DN5 1066 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CCDC43Q96MW1 224 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 FAM110AQ9BQ89 295 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 ACAT2Q9BWD1 397 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 MVB12BQ9H7P6 319 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SLC2A4RGQ9NR83 387 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 SYBUQ9NX95 663 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CWC15Q9P013 229 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 FOXJ2Q9P0K8 574 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 KCNK7Q9Y2U2 307 aa7.44□□□□□ -1.22
GAPVD1-217ENST00000479511 CGB1A6NKQ9 187 aa7.43□□□□□ -1.22
GAPVD1-217ENST00000479511 CELF2O95319 508 aaKnown RBP7.43□□□□□ -1.22
GAPVD1-217ENST00000479511 PLAUP00749 431 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms