RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PRSS38A1L453 326 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 AURKAO14965 403 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 STX7O15400 261 aaKnown RBP20.37■□□□□ 0.85
VARS-224ENST00000479051 USP12O75317 370 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 CRTAMO95727 393 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 GAS8O95995 478 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 SOD1P00441 154 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 ANXA6P08133 673 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 KCNJ1P48048 391 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 SPARCL1Q14515 664 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 TAF1AQ15573 450 aaPredicted RBP20.37■□□□□ 0.85
VARS-224ENST00000479051 SDR16C5Q8N3Y7 309 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 TTC30BQ8N4P2 665 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 OR4C6Q8NH72 309 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 BRSK1Q8TDC3 778 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 SCG3Q8WXD2 468 aaKnown RBP20.37■□□□□ 0.85
VARS-224ENST00000479051 OR1E3Q8WZA6 343 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 CNDP2Q96KP4 475 aaKnown RBP20.37■□□□□ 0.85
VARS-224ENST00000479051 AGAP2Q99490 1192 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 LRRC61Q9BV99 259 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 AP1M1Q9BXS5 423 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 ETNK1Q9HBU6 452 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 FGF22Q9HCT0 170 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 RAB6BQ9NRW1 208 aa20.37■□□□□ 0.85
VARS-224ENST00000479051 TDRD6O60522 2096 aaKnown RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 SPAARA0A1B0GVQ0 90 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 INPP4BO15327 924 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 ASMTLO95671 621 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 ETS1P14921 441 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 BPIP17213 487 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 LPOP22079 712 aaPredicted RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 SPAM1P38567 509 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 OLIG2Q13516 323 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 SEMA5AQ13591 1074 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 DOK6Q6PKX4 331 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 PPP1R21Q6ZMI0 780 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 GKN2Q86XP6 184 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 GPR26Q8NDV2 337 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 PDXPQ96GD0 296 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 WDR24Q96S15 920 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 FRMD8Q9BZ67 464 aaPredicted RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 TCEAL2Q9H3H9 227 aaPredicted RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 CYP4F12Q9HCS2 524 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 BPIFA1Q9NP55 256 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 IL17CQ9P0M4 197 aa20.36■□□□□ 0.85
VARS-224ENST00000479051 APOBEC2Q9Y235 224 aaKnown RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 CNOT1A5YKK6 2376 aaKnown RBP20.36■□□□□ 0.85
VARS-224ENST00000479051 PCNX2A6NKB5 2137 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 LMO7DNF2Z398 122 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 TPP1O14773 563 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 IVLP07476 585 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 RPL22P35268 128 aaKnown RBP20.35■□□□□ 0.85
VARS-224ENST00000479051 C1orf61Q13536 156 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 CYP1B1Q16678 543 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 PAPD7Q5XG87 772 aaKnown RBP20.35■□□□□ 0.85
VARS-224ENST00000479051 DNAAF3Q8N9W5 541 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 GRK7Q8WTQ7 553 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 COX14Q96I36 57 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 CARS2Q9HA77 564 aaKnown RBP20.35■□□□□ 0.85
VARS-224ENST00000479051 NCKIPSDQ9NZQ3 722 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 PNMA8BQ9ULN7 279 aaPredicted RBP20.35■□□□□ 0.85
VARS-224ENST00000479051 SLC17A4Q9Y2C5 497 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 SAR1BQ9Y6B6 198 aa20.35■□□□□ 0.85
VARS-224ENST00000479051 COL5A1P20908 1838 aaPredicted RBP20.34■□□□□ 0.85
VARS-224ENST00000479051 FADS2P1A8MWK0 482 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 ZNF185O15231 689 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 SIGLEC6O43699 453 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 PHF2O75151 1096 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 CEACAM5P06731 702 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 APRTP07741 180 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 ZSCAN5DPP0CG00 497 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 CDH17Q12864 832 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 DENND5AQ6IQ26 1287 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 ZCCHC8Q6NZY4 707 aaKnown RBP20.34■□□□□ 0.85
VARS-224ENST00000479051 CCDC137Q6PK04 289 aaKnown RBP20.34■□□□□ 0.85
VARS-224ENST00000479051 LVRNQ6Q4G3 990 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 PRUNE1Q86TP1 453 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 TRIM74Q86UV6 250 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 PHYKPLQ8IUZ5 450 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 GLIS1Q8NBF1 620 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 DTX3LQ8TDB6 740 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 GLMNQ92990 594 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 MRPL40Q9NQ50 206 aaKnown RBP20.34■□□□□ 0.85
VARS-224ENST00000479051 VPS18Q9P253 973 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 ARL5AQ9Y689 179 aa20.34■□□□□ 0.85
VARS-224ENST00000479051 GLYATL1P3A0A0U1RQE8 302 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 TRIM38O00635 465 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 SUN1O94901 812 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 SLC25A14O95258 325 aaPredicted RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 COILP38432 576 aaPredicted RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 GNPDA1P46926 289 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 FNTAP49354 379 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 DUSP3P51452 185 aaPredicted RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 BASP1P80723 227 aaKnown RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 DAB2P98082 770 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 PEX6Q13608 980 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 LAMB3Q13751 1172 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 ITGA9Q13797 1035 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 DEFB133Q30KQ1 61 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 N4BP2L1Q5TBK1 243 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms