RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 DUS1LQ6P1R4 473 aaKnown RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 TMEM154Q6P9G4 183 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 KLHL35Q6PF15 583 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 GLDNQ6ZMI3 551 aaPredicted RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 C16orf82Q7Z2V1 217 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 RBM23Q86U06 439 aaKnown RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 TTC30BQ8N4P2 665 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 CSNK2A3Q8NEV1 391 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 SCFD2Q8WU76 684 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 TANKQ92844 425 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 PPP1R13BQ96KQ4 1090 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 C1orf74Q96LT6 269 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 TIGD1Q96MW7 591 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 ZNF385AQ96PM9 386 aaKnown RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 NCAPGQ9BPX3 1015 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 PDZD7Q9H5P4 517 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 KAT14Q9H8E8 782 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 PCDH9Q9HC56 1237 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 LTB4R2Q9NPC1 389 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 ACSS1Q9NUB1 689 aaPredicted RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 MCM9Q9NXL9 1143 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 ZNF224Q9NZL3 707 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 CWC15Q9P013 229 aaKnown RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 MALT1Q9UDY8 824 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 SIX4Q9UIU6 781 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 NOL7Q9UMY1 257 aaKnown RBP3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 PCDHGB1Q9Y5G3 927 aa3.92□□□□□ -1.78
SMARCA1-204ENST00000478420 C1orf226A1L170 272 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 A6NCN8 305 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 SCAMP1O15126 338 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 HCRTR2O43614 444 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 TMEM11P17152 192 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 UBA1P22314 1058 aaKnown RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 PRCPP42785 496 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 CLCN3P51790 818 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 NAP1L1P55209 391 aaKnown RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 ZNF155Q12901 538 aaPredicted RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 CRYMQ14894 314 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 ZSCAN23Q3MJ62 389 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 GPATCH4Q5T3I0 446 aaKnown RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 C9orf57Q5W0N0 161 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 FRG2Q64ET8 278 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 SEPT14Q6ZU15 432 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 ARMC9Q7Z3E5 817 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 KRT77Q7Z794 578 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 CHERPQ8IWX8 916 aaKnown RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 ZKSCAN4Q969J2 545 aaPredicted RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 ORAI1Q96D31 301 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 BICD1Q96G01 975 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 CMTM3Q96MX0 182 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 DUX5Q96PT3 197 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 SEPT5Q99719 369 aaPredicted RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 CHCHD6Q9BRQ6 235 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 SLCO5A1Q9H2Y9 848 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 GAREM1Q9H706 876 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 BLOC1S4Q9NUP1 217 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 SEPT11Q9NVA2 429 aaKnown RBP3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 C1RLQ9NZP8 487 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 VDAC3Q9Y277 283 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 LOXL2Q9Y4K0 774 aa3.91□□□□□ -1.78
SMARCA1-204ENST00000478420 PLSCR5A0PG75 271 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 DENND3A2RUS2 1198 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 MAGEA13PA6NCF6 341 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 AP3D1O14617 1153 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 MID1O15344 667 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 SPINT2O43291 252 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 PPP1R3DO95685 299 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 PMS2P2O95744 297 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 AFPP02771 609 aaKnown RBP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 LINC00271P0C7V0 271 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 MAPK4P31152 587 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 FASLGP48023 281 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 GALCP54803 685 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 LRMPQ12912 555 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 KCNT1Q5JUK3 1230 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 DCST1Q5T197 706 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 GKAP1Q5VSY0 366 aaPredicted RBP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 ARMC3Q5W041 872 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 RUSC1-AS1Q66K80 236 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 MZT2BQ6NZ67 158 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 PRSS57Q6UWY2 283 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 TICAM1Q8IUC6 712 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 CREBRFQ8IUR6 639 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 RNF168Q8IYW5 571 aaPredicted RBP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 PCDH20Q8N6Y1 951 aaKnown RBP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 OR2AK2Q8NG84 335 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 LMO3Q8TAP4 145 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 TMEM19Q96HH6 336 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 GRAMD2BQ96HH9 432 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 IGSF21Q96ID5 467 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 C1QTNF4Q9BXJ3 329 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 FTOQ9C0B1 505 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 PLEKHA5Q9HAU0 1116 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 OR14J1Q9UGF5 321 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 ZNF580Q9UK33 172 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 ACSL5Q9ULC5 683 aa3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 R3HDM2Q9Y2K5 976 aaKnown RBP3.9□□□□□ -1.79
SMARCA1-204ENST00000478420 SAA2-SAA4A0A096LPE2 208 aa3.89□□□□□ -1.79
SMARCA1-204ENST00000478420 M0QZ24 198 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms