RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 SGF29Q96ES7 293 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 LYSMD1Q96S90 227 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 ABCG8Q9H221 673 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 RMI1Q9H9A7 625 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 RDH14Q9HBH5 336 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 CD84Q9UIB8 345 aa14.37□□□□□ -0.11
SMARCE1-209ENST00000478349 PRAMEF33A0A0G2JMD5 474 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 C1orf232A0A0U1RR37 186 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ZNF487B1APH4 448 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 PRAMEF10O60809 474 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 PDHA1P08559 390 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 CD48P09326 243 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 PLA2G2AP14555 144 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ZFXP17010 805 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ITIH1P19827 911 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 AK4P27144 223 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 CASP14P31944 242 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 FASLGP48023 281 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ARSEP51690 589 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 OR1D5P58170 312 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 PYCR3Q53H96 274 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 USP7Q93009 1102 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 FAF2Q96CS3 445 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 SRPK1Q96SB4 655 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 SLC38A3Q99624 504 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 HERPUD2Q9BSE4 406 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 ASPSCR1Q9BZE9 553 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 CHKBQ9Y259 395 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 BPTFQ12830 3046 aa14.36□□□□□ -0.11
SMARCE1-209ENST00000478349 SSU72P8A0A1W2PR75 194 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 LRRD1A4D1F6 860 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 GPR89AB7ZAQ6 455 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 J3QKU1 62 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PPP1R12AO14974 1030 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 AKR1B10O60218 316 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 SOD1P00441 154 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 TMEM253P0C7T8 217 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 GPR89BP0CG08 455 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 TNNT3P45378 269 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 POLD2P49005 469 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 LIMK2P53671 638 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 RAB15P59190 212 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PTSQ03393 145 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 SQSTM1Q13501 440 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PDK1Q15118 436 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 CCDC70Q6NSX1 233 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 MARK2Q7KZI7 788 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PHYKPLQ8IUZ5 450 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 RHOT2Q8IXI1 618 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 NAGSQ8N159 534 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 SCAMP4Q969E2 229 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 CCDC74BQ96LY2 380 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 TAAR9Q96RI9 348 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 NUDT22Q9BRQ3 303 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 MLPHQ9BV36 600 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 RIOK2Q9BVS4 552 aaKnown RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 BRD8Q9H0E9 1235 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 SEMA6CQ9H3T2 930 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 EPB41L1Q9H4G0 881 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 FAM83DQ9H4H8 585 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 PCDHGA3Q9Y5H0 932 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 HEMK1Q9Y5R4 338 aaPredicted RBP14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 LRP4O75096 1905 aa14.35□□□□□ -0.11
SMARCE1-209ENST00000478349 GCN1Q92616 2671 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 COL27A1Q8IZC6 1860 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 IGHV1OR21-1A0A087WYE8 117 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 IGHV5-10-1A0A0J9YXX1 117 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 OR5K4A6NMS3 321 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 APOL1O14791 398 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 INPP4BO15327 924 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 EFSO43281 561 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 B4GAT1O43505 415 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 MTA2O94776 668 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 HLA-DQB2P05538 268 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 CD1CP29017 333 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 ARHGAP25P42331 645 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 IFI35P80217 286 aaPredicted RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 GBE1Q04446 702 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 PPIDQ08752 370 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 C16orf72Q14CZ0 275 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 ZNF569Q5MCW4 686 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 BZW1Q7L1Q6 419 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 SLC9B2Q86UD5 537 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 SFRP1Q8N474 314 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 ARRDC2Q8TBH0 407 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 COX14Q96I36 57 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 TEFMQ96QE5 360 aaKnown RBP14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 DDA1Q9BW61 102 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms