RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 DSC2Q02487 901 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 GALNT2Q10471 571 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 PAFAH1B3Q15102 231 aaKnown RBP16.61■□□□□ 0.25
TRIM13-208ENST00000478111 ATP13A4Q4VNC1 1196 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 NCBP2-AS2Q69YL0 99 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 CPNE8Q86YQ8 564 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 ARRDC2Q8TBH0 407 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 JPH3Q8WXH2 748 aaPredicted RBP16.61■□□□□ 0.25
TRIM13-208ENST00000478111 WDR24Q96S15 920 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 NUP85Q9BW27 656 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 POLR1EQ9GZS1 481 aaKnown RBP16.61■□□□□ 0.25
TRIM13-208ENST00000478111 CDH19Q9H159 772 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 CLMPQ9H6B4 373 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 PDP2Q9P2J9 529 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 ANAPC7Q9UJX3 599 aa16.61■□□□□ 0.25
TRIM13-208ENST00000478111 CNOT6Q9ULM6 557 aaKnown RBP16.61■□□□□ 0.25
TRIM13-208ENST00000478111 A0A087X0T9 212 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 STMND1H3BQB6 276 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 MATN3O15232 486 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 ZW10O43264 779 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 FAM228BP0C875 321 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 ZNF30P17039 623 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 FASLGP48023 281 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 ITKQ08881 620 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 PEX6Q13608 980 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 KRT81Q14533 505 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 TMEM71Q6P5X7 295 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 MARK2Q7KZI7 788 aaKnown RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 NRSN1Q8IZ57 195 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 SLC37A2Q8TED4 501 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 FATE1Q969F0 183 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 TSGA13Q96PP4 275 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 ARHGAP9Q9BRR9 750 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 RIOK2Q9BVS4 552 aaKnown RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 SLC12A9Q9BXP2 914 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 TDRD1Q9BXT4 1180 aaKnown RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 OCIAD1Q9NX40 245 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 CHKBQ9Y259 395 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 B3GALT1Q9Y5Z6 326 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 BZW2Q9Y6E2 419 aaKnown RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 OAS3Q9Y6K5 1087 aaKnown RBP16.6■□□□□ 0.25
TRIM13-208ENST00000478111 NBASA2RRP1 2371 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 RELNP78509 3460 aa16.6■□□□□ 0.25
TRIM13-208ENST00000478111 TRBV23OR9-2A0A075B6M9 112 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 A0A1W2PQJ5 194 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 DNAJC6O75061 913 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 CLDN7O95471 211 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 UGT1A3P35503 534 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 NFKB2Q00653 900 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 KCNC4Q03721 635 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 NIPAL4Q0D2K0 466 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 CLCA4Q14CN2 919 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
TRIM13-208ENST00000478111 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-208ENST00000478111 PRICKLE2Q7Z3G6 844 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 ZNF761Q86XN6 746 aaPredicted RBP16.59■□□□□ 0.25
TRIM13-208ENST00000478111 NDUFAF2Q8N183 169 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 SFRP1Q8N474 314 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRIM13-208ENST00000478111 BMPERQ8N8U9 685 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 ZSCAN1Q8NBB4 408 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 AGBL5Q8NDL9 886 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 EXD1Q8NHP7 514 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 LRRN4Q8WUT4 740 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 ART4Q93070 314 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 DDA1Q9BW61 102 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 RBM22Q9NW64 420 aaKnown RBP eCLIP16.59■□□□□ 0.25
TRIM13-208ENST00000478111 KCNK4Q9NYG8 393 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 AMACRQ9UHK6 382 aa16.59■□□□□ 0.25
TRIM13-208ENST00000478111 CYSRT1A8MQ03 144 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 TERTO14746 1132 aaKnown RBP16.58■□□□□ 0.24
TRIM13-208ENST00000478111 INPP4BO15327 924 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 PYGLP06737 847 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 CES1P23141 567 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 CCNCP24863 283 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 GPLD1P80108 840 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 BIRC2Q13490 618 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 LRP8Q14114 963 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 IFI16Q16666 785 aaKnown RBP16.58■□□□□ 0.24
TRIM13-208ENST00000478111 ANKRD20A8PQ5CZ79 823 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 GALNT13Q8IUC8 556 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 RAVER1Q8IY67 606 aaKnown RBP16.58■□□□□ 0.24
TRIM13-208ENST00000478111 LYSMD1Q96S90 227 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 DPYSL5Q9BPU6 564 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 SPRY4Q9C004 299 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 FAM117AQ9C073 453 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 NENFQ9UMX5 172 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 PRKAB1Q9Y478 270 aa16.58■□□□□ 0.24
TRIM13-208ENST00000478111 FADS2P1A8MWK0 482 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 B4E171 279 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 MYO1FO00160 1098 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 SUV39H1O43463 412 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 SERPINC1P01008 464 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 ATP1A1P05023 1023 aaKnown RBP16.57■□□□□ 0.24
TRIM13-208ENST00000478111 SERPING1P05155 500 aa16.57■□□□□ 0.24
TRIM13-208ENST00000478111 HLA-DQB2P05538 268 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms