RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TMEM135Q86UB9 458 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 IQCHQ86VS3 1027 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 SLC22A18ASQ8N1D0 253 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 TRAM1L1Q8N609 369 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 MFSD2AQ8NA29 543 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 OR13H1Q8NG92 308 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 PIGKQ92643 395 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 LRRC39Q96DD0 335 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 MFSD3Q96ES6 412 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 STAMBPL1Q96FJ0 436 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 CDKN2AIPNLQ96HQ2 116 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 EBNA1BP2Q99848 306 aaKnown RBP19.84■□□□□ 0.77
ACTB-210ENST00000477812 TEX101Q9BY14 249 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 ANKZF1Q9H8Y5 726 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 TMPRSS11EQ9UL52 423 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 RAB23Q9ULC3 237 aa19.84■□□□□ 0.77
ACTB-210ENST00000477812 CNOT6Q9ULM6 557 aaKnown RBP19.84■□□□□ 0.77
ACTB-210ENST00000477812 FRYLO94915 3013 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 GLYATL1P3A0A0U1RQE8 302 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 A0A1B0GTW7 788 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 MAGEB16A2A368 324 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 A6NNZ2 444 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 GPR39O43194 453 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 CD38P28907 300 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 CA5AP35218 305 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 AFF3P51826 1226 aaKnown RBP19.83■□□□□ 0.77
ACTB-210ENST00000477812 TMPRSS15P98073 1019 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 CUL1Q13616 776 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 STAT4Q14765 748 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 CHRNA6Q15825 494 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 ATP13A5Q4VNC0 1218 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 PLA2G2CQ5R387 149 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 TPRG1LQ5T0D9 272 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 PDPK2PQ6A1A2 396 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 RAET1GQ6H3X3 334 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 CES3Q6UWW8 571 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 TBATAQ96M53 351 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 FCRL3Q96P31 734 aaPredicted RBP19.83■□□□□ 0.77
ACTB-210ENST00000477812 ZSCAN5AQ9BUG6 496 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 FOXP3Q9BZS1 431 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 SUDS3Q9H7L9 328 aaPredicted RBP19.83■□□□□ 0.77
ACTB-210ENST00000477812 AASDHPPTQ9NRN7 309 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 SUSD2Q9UGT4 822 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 RAPGEFL1Q9UHV5 662 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 OR1A2Q9Y585 309 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 MAD1L1Q9Y6D9 718 aa19.83■□□□□ 0.77
ACTB-210ENST00000477812 ZCWPW2A0A1B0GU75 182 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 CCDC162PA2VCL2 907 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 AGAP14A8MT82 685 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 VILLO15195 856 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 EIF3HO15372 352 aaKnown RBP eCLIP19.82■□□□□ 0.76
ACTB-210ENST00000477812 SRP72O76094 671 aaKnown RBP19.82■□□□□ 0.76
ACTB-210ENST00000477812 PRAMEF1O95521 474 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 PYGLP06737 847 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 HOXC4P09017 264 aaPredicted RBP19.82■□□□□ 0.76
ACTB-210ENST00000477812 MPLP40238 635 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 ELK3P41970 407 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 GPR1P46091 355 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 TUBB4BP68371 445 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 CDK3Q00526 305 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 OVGP1Q12889 678 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 PDIA2Q13087 525 aaKnown RBP19.82■□□□□ 0.76
ACTB-210ENST00000477812 ANKRD20A4Q4UJ75 823 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 CASC4Q6P4E1 433 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 Q6ZSR6 202 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 HEATR4Q86WZ0 1026 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 IFT20Q8IY31 132 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 FAM174AQ8TBP5 190 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 FUBP1Q96AE4 644 aaKnown RBP19.82■□□□□ 0.76
ACTB-210ENST00000477812 SGSM3Q96HU1 749 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 COX14Q96I36 57 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 SPATA16Q9BXB7 569 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 WDR26Q9H7D7 661 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 CAPN10Q9HC96 672 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 SMOXQ9NWM0 555 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 SAMD15Q9P1V8 674 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 APPL1Q9UKG1 709 aa19.82■□□□□ 0.76
ACTB-210ENST00000477812 FNDC3AQ9Y2H6 1198 aaKnown RBP19.82■□□□□ 0.76
ACTB-210ENST00000477812 PRR5-ARHGAP8B1AHC4 643 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 TOR1BO14657 336 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 USP1O94782 785 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 RETP07949 1114 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 GNSP15586 552 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 PGAM1P18669 254 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 MC4RP32245 332 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 RABIFP47224 123 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 ARCN1P48444 511 aaKnown RBP19.81■□□□□ 0.76
ACTB-210ENST00000477812 YPEL5P62699 121 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 BNC1Q01954 994 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 NHLH1Q02575 133 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 NFATC2Q13469 925 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 STEAP4Q687X5 459 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 KIAA0930Q6ICG6 404 aaPredicted RBP19.81■□□□□ 0.76
ACTB-210ENST00000477812 CENPUQ71F23 418 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 PTAR1Q7Z6K3 402 aaPredicted RBP19.81■□□□□ 0.76
ACTB-210ENST00000477812 IFT81Q8WYA0 676 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 HDAC10Q969S8 669 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 VPS35Q96QK1 796 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 NAT9Q9BTE0 207 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 APOOQ9BUR5 198 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms