RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 HTR3CQ8WXA8 447 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 AP2M1Q96CW1 435 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 MS4A14Q96JA4 679 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 LYSMD1Q96S90 227 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 MLPHQ9BV36 600 aaPredicted RBP17.58■□□□□ 0.41
PTPN7-209ENST00000477554 FRMD8Q9BZ67 464 aaPredicted RBP17.58■□□□□ 0.41
PTPN7-209ENST00000477554 CNOT6Q9ULM6 557 aaKnown RBP17.58■□□□□ 0.41
PTPN7-209ENST00000477554 PCDHGA1Q9Y5H4 931 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 CSNK1G3Q9Y6M4 447 aa17.58■□□□□ 0.41
PTPN7-209ENST00000477554 PRSS38A1L453 326 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 CPED1A4D0V7 1026 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 NEMP2A6NFY4 417 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 H7C0C1 242 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 APOC4-APOC2K7ER74 178 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 CACNB4O00305 520 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-209ENST00000477554 TOR1BO14657 336 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 APOC2P02655 101 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 PROS1P07225 676 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 MYCLP1P12525 358 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-209ENST00000477554 HTR1BP28222 390 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 ATP5OP48047 213 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 CDK18Q07002 472 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 CKAP4Q07065 602 aaKnown RBP17.57■□□□□ 0.4
PTPN7-209ENST00000477554 C6orf132Q5T0Z8 1188 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 IFI44Q8TCB0 444 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 BTN2A2Q8WVV5 523 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 MRGPRX2Q96LB1 330 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 KLHL8Q9P2G9 620 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-209ENST00000477554 PRKAB1Q9Y478 270 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 DGKBQ9Y6T7 804 aa17.57■□□□□ 0.4
PTPN7-209ENST00000477554 ARHGEF17Q96PE2 2063 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-209ENST00000477554 AK4P27144 223 aaPredicted RBP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 CA5AP35218 305 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 GPR1P46091 355 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 SPINT3P49223 89 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 WNT3AP56704 352 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 DPTQ07507 201 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 TARDBPQ13148 414 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 ALS2CLQ60I27 953 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 ZCCHC8Q6NZY4 707 aaKnown RBP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 MARK2Q7KZI7 788 aaKnown RBP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 PID1Q7Z2X4 250 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 EFL1Q7Z2Z2 1120 aaKnown RBP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 SLC25A41Q8N5S1 370 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 GPR26Q8NDV2 337 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 CARS2Q9HA77 564 aaKnown RBP17.56■□□□□ 0.4
PTPN7-209ENST00000477554 ZMIZ1Q9ULJ6 1067 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 SUFUQ9UMX1 484 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 PCDHB1Q9Y5F3 818 aa17.56■□□□□ 0.4
PTPN7-209ENST00000477554 GPR39O43194 453 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 KRT37O76014 449 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TNFP01375 233 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ANXA6P08133 673 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 HOXC4P09017 264 aaPredicted RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ALPPL2P10696 532 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 CTSEP14091 401 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ZNF30P17039 623 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 GNPDA1P46926 289 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 EIF3EP60228 445 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 RPL26P61254 145 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 KLF1Q13351 362 aaPredicted RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 SIRPB2Q5JXA9 342 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 HENMT1Q5T8I9 393 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TTC13Q8NBP0 860 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 PATE1Q8WXA2 126 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 DUSP23Q9BVJ7 150 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 USP29Q9HBJ7 922 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 BPIFA1Q9NP55 256 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 RRAGDQ9NQL2 400 aaPredicted RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 GULP1Q9UBP9 304 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 RPL26L1Q9UNX3 145 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ZNF711Q9Y462 761 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 GOLGA6L10A0A0M3HER8 536 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 LOC285095A0A1B0GVY8 99 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 PMS2P1A4D2B8 440 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TRABD2BA6NFA1 517 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TPP1O14773 563 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 BUD23O43709 281 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 OPA1O60313 960 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 RBP3P10745 1247 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 GDF10P55107 478 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 PTPRCAPQ14761 206 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ADAMTSL4Q6UY14 1074 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 BZW1Q7L1Q6 419 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 CEP112Q8N8E3 955 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 IPMKQ8NFU5 416 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 ZCCHC14Q8WYQ9 949 aaKnown RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 COX14Q96I36 57 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TBATAQ96M53 351 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 FCRL5Q96RD9 977 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 APOL2Q9BQE5 337 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 L2HGDHQ9H9P8 463 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 PHPT1Q9NRX4 125 aaPredicted RBP17.55■□□□□ 0.4
PTPN7-209ENST00000477554 HOMER3Q9NSC5 361 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 FAM153AQ9UHL3 310 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 TMPRSS11EQ9UL52 423 aa17.55■□□□□ 0.4
PTPN7-209ENST00000477554 GPR34Q9UPC5 381 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms