RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SLC25A51Q9H1U9 297 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 SYNDIG1Q9H7V2 258 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 RABGEF1Q9UJ41 708 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 MOSPD1Q9UJG1 213 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 APPL1Q9UKG1 709 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 PCDHA3Q9Y5H8 950 aa16.14■□□□□ 0.17
COL1A1-205ENST00000476387 KIF26BQ2KJY2 2108 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 C1orf232A0A0U1RR37 186 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 PRSS38A1L453 326 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 GRID2IPA4D2P6 1211 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 CDRT15L2A8MXV6 281 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 D6RAR5 112 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 PRLP01236 227 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 APOC2P02655 101 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 PNLIPP16233 465 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TEAD1P28347 426 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TNNT3P45378 269 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 GPR1P46091 355 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 STC1P52823 247 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TMPRSS3P57727 454 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 ADCY2Q08462 1091 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 GALNT3Q14435 633 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TCEA2Q15560 299 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 SLC14A2Q15849 920 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 PCSK7Q16549 785 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 ZNF765Q7L2R6 523 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TAF8Q7Z7C8 310 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 CLEC14AQ86T13 490 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 LRRC57Q8N9N7 239 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 AP2M1Q96CW1 435 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 QKIQ96PU8 341 aaKnown RBP eCLIP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 SMIM14Q96QK8 99 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 FERMT1Q9BQL6 677 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 MLPHQ9BV36 600 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 LGR4Q9BXB1 951 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 TEX101Q9BY14 249 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 GLOD4Q9HC38 313 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 KLHL8Q9P2G9 620 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 CD84Q9UIB8 345 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 AMFRQ9UKV5 643 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 SSUH2Q9Y2M2 353 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 ARHGEF17Q96PE2 2063 aaPredicted RBP16.13■□□□□ 0.17
COL1A1-205ENST00000476387 SCN8AQ9UQD0 1980 aa16.13■□□□□ 0.17
COL1A1-205ENST00000476387 A0A0U1RQS6 177 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 HACD1B0YJ81 288 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 ANKRD66B4E2M5 251 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 H7C0C1 242 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CASC3O15234 703 aaKnown RBP16.12■□□□□ 0.17
COL1A1-205ENST00000476387 RPLP0P05388 317 aaKnown RBP16.12■□□□□ 0.17
COL1A1-205ENST00000476387 PTMAP06454 111 aaKnown RBP16.12■□□□□ 0.17
COL1A1-205ENST00000476387 PYGLP06737 847 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 ITGA2BP08514 1039 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 GLB1P16278 677 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 ATP5OP48047 213 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CXADRP78310 365 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CCL7P80098 99 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CDK3Q00526 305 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 DPTQ07507 201 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 QPCTQ16769 361 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CERCAMQ5T4B2 595 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CCDC70Q6NSX1 233 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 TECPR1Q7Z6L1 1165 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CCNJLQ8IV13 435 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 PELI3Q8N2H9 469 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 UBL4BQ8N7F7 174 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 FAM46DQ8NEK8 389 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CCHCR1Q8TD31 782 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 SLC39A7Q92504 469 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 TEKT5Q96M29 485 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 TMEM74Q96NL1 305 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 LYSMD1Q96S90 227 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 VAT1Q99536 393 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 OSBPL8Q9BZF1 889 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 STRADBQ9C0K7 418 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 TMEM168Q9H0V1 697 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 LRRN3Q9H3W5 708 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 CYP4F12Q9HCS2 524 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 MRPL40Q9NQ50 206 aaKnown RBP16.12■□□□□ 0.17
COL1A1-205ENST00000476387 PKD2L2Q9NZM6 624 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 TRIM10Q9UDY6 481 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 EFR3BQ9Y2G0 817 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 AHCTF1Q8WYP5 2266 aa16.12■□□□□ 0.17
COL1A1-205ENST00000476387 UNC13CQ8NB66 2214 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 A0A1W2PQM1 296 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 KLK10O43240 276 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 NUDT21O43809 227 aaKnown RBP16.11■□□□□ 0.17
COL1A1-205ENST00000476387 NOBOXO60393 691 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 TNFSF15O95150 251 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 CLDN7O95471 211 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 CCKBRP32239 447 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 PTPN7P35236 360 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 PTSQ03393 145 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 CDK18Q07002 472 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 XRCC4Q13426 336 aa16.11■□□□□ 0.17
COL1A1-205ENST00000476387 HLTFQ14527 1009 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL1A1-205ENST00000476387 NOMO1Q15155 1222 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms