RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MBTPS1Q14703 1052 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 UGP2Q16851 508 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 MYLK3Q32MK0 819 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ANKRD26P1Q6NSI1 321 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF280BQ86YH2 543 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ATG16L2Q8NAA4 619 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SIDT2Q8NBJ9 832 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PPTC7Q8NI37 304 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SLC35F5Q8WV83 523 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 C7orf26Q96N11 449 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PPP1R10Q96QC0 940 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 DUSP16Q9BY84 665 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 NAA50Q9GZZ1 169 aaKnown RBP4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ATP13A1Q9HD20 1204 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 TMLHEQ9NVH6 421 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 DNAJC28Q9NX36 388 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 PKD2L2Q9NZM6 624 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 SH3BP4Q9P0V3 963 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 DAPK2Q9UIK4 370 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 CRLS1Q9UJA2 301 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 EMCNQ9ULC0 261 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 RAP2CQ9Y3L5 183 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 ST14Q9Y5Y6 855 aa4.98□□□□□ -1.61
CCDC39-204ENST00000476379 LCHNA4D1U4 455 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CCDC154A6NI56 674 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SRRM3A6NNA2 597 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TBKBP1A7MCY6 615 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SAP18O00422 153 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PRRG1O14668 218 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SLC26A4O43511 780 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 B4GALT3O60512 393 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TPST2O60704 377 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DUSP11O75319 330 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF189O75820 626 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TNFAIP8O95379 198 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 STAU1O95793 577 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TGFB3P10600 412 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HAPLN1P10915 354 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PCSK6P29122 969 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HSPA7P48741 367 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TMED10P49755 219 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SERPINH1P50454 418 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RNF144AP50876 292 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 RPS6KA3P51812 740 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 KPNA2P52292 529 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NKX2-5P52952 324 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZXDBP98169 803 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CTC1Q2NKJ3 1217 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ANKDD1AQ495B1 522 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ALFQ53S48 1182 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF484Q5JVG2 852 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 REP15Q6BDI9 236 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 XRRA1Q6P2D8 792 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FOXR2Q6PJQ5 311 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NECAB2Q7Z6G3 386 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 FNIP1Q8TF40 1166 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ANKRD49Q8WVL7 239 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 QKIQ96PU8 341 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CCDC106Q9BWC9 280 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PRRG3Q9BZD7 231 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 EBF1Q9UH73 591 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CNOT6Q9ULM6 557 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PCDHGC3Q9UN70 934 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ORC6Q9Y5N6 252 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SVILO95425 2214 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DOCK6Q96HP0 2047 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DHRS12A0PJE2 317 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 XYLBO75191 536 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SERPINI2O75830 405 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ANXA9O76027 345 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PFKMP08237 780 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DBTP11182 482 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 EDNRBP24530 442 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HALP42357 657 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PLD1Q13393 1074 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 TARBP2Q15633 366 aaKnown RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SPANXN3Q5MJ09 141 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 C6orf183Q5T699 404 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 GALNT18Q6P9A2 607 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SLC2A7Q6PXP3 512 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PRSS55Q6UWB4 352 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 GLB1LQ6UWU2 654 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 B3GNT6Q6ZMB0 384 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZNF621Q6ZSS3 439 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 BBS5Q8N3I7 341 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 OR10A6Q8NH74 314 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ZFP28Q8NHY6 868 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 PSMA8Q8TAA3 256 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 DDI1Q8WTU0 396 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 JADE3Q92613 823 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SLCO2A1Q92959 643 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 NSMCE2Q96MF7 247 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 MLPHQ9BV36 600 aaPredicted RBP4.97□□□□□ -1.61
CCDC39-204ENST00000476379 LHX5Q9H2C1 402 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CATSPERBQ9H7T0 1116 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 ACTR8Q9H981 624 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 SPAG4Q9NPE6 437 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 CRTAC1Q9NQ79 661 aa4.97□□□□□ -1.61
CCDC39-204ENST00000476379 UBAP1Q9NZ09 502 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms