RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 IGLV5-37A0A075B6J1 123 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ATP2A1O14983 1001 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 HS6ST1O60243 411 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 PAPSS2O95340 614 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 CLDN14O95500 239 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 RB1P06400 928 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ALOX12P18054 663 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 UBA1P22314 1058 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 TNFRSF8P28908 595 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 TAS2R40P59535 323 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 SEC61BP60468 96 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 SEC61A1P61619 476 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 TUBA1BP68363 451 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 MRPS34P82930 218 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ZXDBP98169 803 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ECT2LQ008S8 904 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 CREB5Q02930 508 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 FOXM1Q08050 763 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 LRMPQ12912 555 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 IKQ13123 557 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 PRKG2Q13237 762 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 OASLQ15646 514 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 PNLIPRP3Q17RR3 467 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ASTE1Q2TB18 679 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 SETMARQ53H47 684 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 KIAA0930Q6ICG6 404 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 JADE1Q6IE81 842 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ADHFE1Q8IWW8 467 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 RPAP2Q8IXW5 612 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF114Q8NC26 417 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 OR2AK2Q8NG84 335 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 OR8K5Q8NH50 307 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 APBB2Q92870 758 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 FAM120BQ96EK7 910 aaKnown RBP4.93□□□□□ -1.62
PTCD3-211ENST00000476215 IL25Q9H293 177 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 PLK3Q9H4B4 646 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 LTB4R2Q9NPC1 389 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 COPG2Q9UBF2 871 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 OR14J1Q9UGF5 321 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 CLIC4Q9Y696 253 aa4.93□□□□□ -1.62
PTCD3-211ENST00000476215 RSF1Q96T23 1441 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 M0QZ24 198 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SPINT2O43291 252 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 RFPL2O75678 378 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 KDM4BO94953 1096 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SRPRAP08240 638 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PLA2G2AP14555 144 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 GABRB1P18505 474 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PSMB10P40306 273 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CAMPP49913 170 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CLCNKAP51800 687 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 NLRP5P59047 1200 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 GRSF1Q12849 480 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CDC16Q13042 620 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PDE1CQ14123 709 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 DUSP28Q4G0W2 176 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SOWAHCQ53LP3 525 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 RILPL1Q5EBL4 403 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 KCNT1Q5JUK3 1230 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 FRG2Q64ET8 278 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CFAP161Q6P656 301 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CCNI2Q6ZMN8 369 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SZRD1Q7Z422 152 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CHERPQ8IWX8 916 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 BEST3Q8N1M1 668 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SRBD1Q8N5C6 995 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PCDH20Q8N6Y1 951 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 HJURPQ8NCD3 748 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 C1orf131Q8NDD1 294 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 NUDCD2Q8WVJ2 157 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 RTP4Q96DX8 246 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PGAM5Q96HS1 289 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 OR2A14Q96R47 310 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 MAK16Q9BXY0 300 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 SPRY4Q9C004 299 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 PIGMQ9H3S5 423 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 C1RLQ9NZP8 487 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 OGFRQ9NZT2 677 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 ADD3Q9UEY8 706 aaKnown RBP4.92□□□□□ -1.62
PTCD3-211ENST00000476215 FBXL17Q9UF56 701 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 FBXW11Q9UKB1 542 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 LOXL2Q9Y4K0 774 aa4.92□□□□□ -1.62
PTCD3-211ENST00000476215 GOLGA6L9A6NEM1 432 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 AGAP14A8MT82 685 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SLC28A2O43868 658 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 GPC4O75487 556 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ANXA7P20073 488 aaKnown RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 DLG1Q12959 904 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 MAD2L1Q13257 205 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-211ENST00000476215 CUL4AQ13619 759 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 WTAPQ15007 396 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SLC39A14Q15043 492 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 SF3B4Q15427 424 aaKnown RBP eCLIP4.91□□□□□ -1.622e-6■■□□□ 11.8
PTCD3-211ENST00000476215 PCGF3Q3KNV8 242 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF585BQ52M93 769 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 ZNF805Q5CZA5 627 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 DCST1Q5T197 706 aa4.91□□□□□ -1.62
PTCD3-211ENST00000476215 PMS2CLQ68D20 193 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms