RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SLC46A1Q96NT5 459 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 ALS2CR12Q96Q35 445 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 LGR4Q9BXB1 951 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 BRD8Q9H0E9 1235 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 CDH19Q9H159 772 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 LRRN3Q9H3W5 708 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 LRIT1Q9P2V4 623 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 DNPEPQ9ULA0 475 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
VARS-223ENST00000474643 CAPN6Q9Y6Q1 641 aa15.09■□□□□ 0.01
VARS-223ENST00000474643 NPIPB15A6NHN6 443 aaPredicted RBP15.08■□□□□ 0
VARS-223ENST00000474643 ITGA2BP08514 1039 aa15.08■□□□□ 0
VARS-223ENST00000474643 TRIM23P36406 574 aa15.08■□□□□ 0
VARS-223ENST00000474643 C19orf57Q0VDD7 668 aa15.08■□□□□ 0
VARS-223ENST00000474643 TAZQ16635 292 aa15.08■□□□□ 0
VARS-223ENST00000474643 CERCAMQ5T4B2 595 aa15.08■□□□□ 0
VARS-223ENST00000474643 PHF19Q5T6S3 580 aa15.08■□□□□ 0
VARS-223ENST00000474643 SLC30A9Q6PML9 568 aa15.08■□□□□ 0
VARS-223ENST00000474643 IGF2-ASQ6U949 168 aa15.08■□□□□ 0
VARS-223ENST00000474643 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0
VARS-223ENST00000474643 ZC3H18Q86VM9 953 aaKnown RBP15.08■□□□□ 0
VARS-223ENST00000474643 TEX26Q8N6G2 289 aa15.08■□□□□ 0
VARS-223ENST00000474643 TFB1MQ8WVM0 346 aaKnown RBP15.08■□□□□ 0
VARS-223ENST00000474643 FATE1Q969F0 183 aa15.08■□□□□ 0
VARS-223ENST00000474643 TRIM44Q96DX7 344 aaPredicted RBP15.08■□□□□ 0
VARS-223ENST00000474643 SCRN2Q96FV2 425 aa15.08■□□□□ 0
VARS-223ENST00000474643 LIN37Q96GY3 246 aaPredicted RBP15.08■□□□□ 0
VARS-223ENST00000474643 BBC3Q96PG8 261 aaPredicted RBP15.08■□□□□ 0
VARS-223ENST00000474643 OSBPL8Q9BZF1 889 aa15.08■□□□□ 0
VARS-223ENST00000474643 CPNE5Q9HCH3 593 aa15.08■□□□□ 0
VARS-223ENST00000474643 PISDQ9UG56 409 aa15.08■□□□□ 0
VARS-223ENST00000474643 AMACRQ9UHK6 382 aa15.08■□□□□ 0
VARS-223ENST00000474643 RABGEF1Q9UJ41 708 aa15.08■□□□□ 0
VARS-223ENST00000474643 PPP2R2CQ9Y2T4 447 aa15.08■□□□□ 0
VARS-223ENST00000474643 LRRK1Q38SD2 2015 aa15.08■□□□□ 0
VARS-223ENST00000474643 H7C0C1 242 aa15.07■□□□□ 0
VARS-223ENST00000474643 NTN3O00634 580 aaPredicted RBP15.07■□□□□ 0
VARS-223ENST00000474643 ATXN7O15265 892 aaPredicted RBP15.07■□□□□ 0
VARS-223ENST00000474643 TJP3O95049 919 aa15.07■□□□□ 0
VARS-223ENST00000474643 ASMTLO95671 621 aa15.07■□□□□ 0
VARS-223ENST00000474643 HLA-DQB2P05538 268 aa15.07■□□□□ 0
VARS-223ENST00000474643 PYGLP06737 847 aa15.07■□□□□ 0
VARS-223ENST00000474643 PECAM1P16284 738 aaPredicted RBP15.07■□□□□ 0
VARS-223ENST00000474643 CR2P20023 1033 aa15.07■□□□□ 0
VARS-223ENST00000474643 CES1P23141 567 aa15.07■□□□□ 0
VARS-223ENST00000474643 ATP5OP48047 213 aa15.07■□□□□ 0
VARS-223ENST00000474643 CDK3Q00526 305 aa15.07■□□□□ 0
VARS-223ENST00000474643 DSC2Q02487 901 aa15.07■□□□□ 0
VARS-223ENST00000474643 AMZ1Q400G9 498 aa15.07■□□□□ 0
VARS-223ENST00000474643 LRRC66Q68CR7 880 aa15.07■□□□□ 0
VARS-223ENST00000474643 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
VARS-223ENST00000474643 Q6ZVL8 140 aa15.07■□□□□ 0
VARS-223ENST00000474643 HSD11B1LQ7Z5J1 315 aa15.07■□□□□ 0
VARS-223ENST00000474643 B3GNT8Q7Z7M8 397 aa15.07■□□□□ 0
VARS-223ENST00000474643 GPR156Q8NFN8 814 aa15.07■□□□□ 0
VARS-223ENST00000474643 ZDHHC1Q8WTX9 485 aa15.07■□□□□ 0
VARS-223ENST00000474643 AP2M1Q96CW1 435 aa15.07■□□□□ 0
VARS-223ENST00000474643 CMKLR1Q99788 373 aa15.07■□□□□ 0
VARS-223ENST00000474643 FERMT1Q9BQL6 677 aa15.07■□□□□ 0
VARS-223ENST00000474643 CEP41Q9BYV8 373 aa15.07■□□□□ 0
VARS-223ENST00000474643 CD84Q9UIB8 345 aa15.07■□□□□ 0
VARS-223ENST00000474643 SUFUQ9UMX1 484 aa15.07■□□□□ 0
VARS-223ENST00000474643 RNF215Q9Y6U7 377 aa15.07■□□□□ 0
VARS-223ENST00000474643 TK2O00142 265 aa15.06■□□□□ 0
VARS-223ENST00000474643 NUDT21O43809 227 aaKnown RBP15.06■□□□□ 0
VARS-223ENST00000474643 PNLIPP16233 465 aa15.06■□□□□ 0
VARS-223ENST00000474643 ZNF30P17039 623 aa15.06■□□□□ 0
VARS-223ENST00000474643 LHCGRP22888 699 aa15.06■□□□□ 0
VARS-223ENST00000474643 ALDH4A1P30038 563 aa15.06■□□□□ 0
VARS-223ENST00000474643 UGT1A5P35504 534 aa15.06■□□□□ 0
VARS-223ENST00000474643 IFI35P80217 286 aaPredicted RBP15.06■□□□□ 0
VARS-223ENST00000474643 RHDQ02161 417 aa15.06■□□□□ 0
VARS-223ENST00000474643 ADCY2Q08462 1091 aa15.06■□□□□ 0
VARS-223ENST00000474643 VAC14Q08AM6 782 aa15.06■□□□□ 0
VARS-223ENST00000474643 KCTD16Q68DU8 428 aa15.06■□□□□ 0
VARS-223ENST00000474643 CCDC81Q6ZN84 652 aa15.06■□□□□ 0
VARS-223ENST00000474643 BBS12Q6ZW61 710 aa15.06■□□□□ 0
VARS-223ENST00000474643 MARK2Q7KZI7 788 aaKnown RBP15.06■□□□□ 0
VARS-223ENST00000474643 SPRED1Q7Z699 444 aa15.06■□□□□ 0
VARS-223ENST00000474643 TSPAN33Q86UF1 283 aa15.06■□□□□ 0
VARS-223ENST00000474643 PIM3Q86V86 326 aa15.06■□□□□ 0
VARS-223ENST00000474643 CCL4L1Q8NHW4 92 aa15.06■□□□□ 0
VARS-223ENST00000474643 SPOCK2Q92563 424 aa15.06■□□□□ 0
VARS-223ENST00000474643 ALG3Q92685 438 aa15.06■□□□□ 0
VARS-223ENST00000474643 AGAP3Q96P47 875 aa15.06■□□□□ 0
VARS-223ENST00000474643 OLFM3Q96PB7 478 aa15.06■□□□□ 0
VARS-223ENST00000474643 TEX101Q9BY14 249 aa15.06■□□□□ 0
VARS-223ENST00000474643 TRNAU1APQ9NX07 287 aaKnown RBP15.06■□□□□ 0
VARS-223ENST00000474643 APPL1Q9UKG1 709 aa15.06■□□□□ 0
VARS-223ENST00000474643 ATXN7L1Q9ULK2 861 aaPredicted RBP15.06■□□□□ 0
VARS-223ENST00000474643 LOXL2Q9Y4K0 774 aa15.06■□□□□ 0
VARS-223ENST00000474643 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 0
VARS-223ENST00000474643 ASXL3Q9C0F0 2248 aa15.05■□□□□ 0
VARS-223ENST00000474643 BAHCC1Q9P281 2608 aa15.05■□□□□ 0
VARS-223ENST00000474643 APOC4-APOC2K7ER74 178 aa15.05■□□□□ -0
VARS-223ENST00000474643 ERVH48-1M5A8F1 160 aa15.05■□□□□ -0
VARS-223ENST00000474643 MTSS1O43312 755 aa15.05■□□□□ -0
VARS-223ENST00000474643 APOC2P02655 101 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms