RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 GRAMD4Q6IC98 578 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 SNX20Q7Z614 316 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 ENDOVQ8N8Q3 282 aaKnown RBP21.66■■□□□ 1.06
CCM2-206ENST00000474617 RBM15BQ8NDT2 890 aaKnown RBP21.66■■□□□ 1.06
CCM2-206ENST00000474617 BIRC8Q96P09 236 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 DCLRE1BQ9H816 532 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 RNPEPL1Q9HAU8 725 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 MAN1C1Q9NR34 630 aa21.66■■□□□ 1.06
CCM2-206ENST00000474617 CXXC1Q9P0U4 656 aaPredicted RBP21.66■■□□□ 1.06
CCM2-206ENST00000474617 HIDE1A8MVS5 230 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 STX16-NPEPL1H3BU86 382 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 STX16O14662 325 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 PRMT5O14744 637 aaPredicted RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 RHOP08100 348 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 FMO4P31512 558 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 CD70P32970 193 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 IL2P60568 153 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 CDC16Q13042 620 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 TPGS1Q6ZTW0 290 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 NET1Q7Z628 596 aaPredicted RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 CUZD1Q86UP6 607 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 PIM3Q86V86 326 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 RBFAQ8N0V3 343 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 CHCHD4Q8N4Q1 142 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 RP9Q8TA86 221 aaKnown RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 SLC22A17Q8WUG5 538 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 SGF29Q96ES7 293 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 ATOH8Q96SQ7 321 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 RTKNQ9BST9 563 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 C1QTNF3Q9BXJ4 246 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 MEAF6Q9HAF1 191 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 ZBTB14O43829 449 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 POP4O95707 220 aaKnown RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 FGF4P08620 206 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 SRCP12931 536 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 KLF10Q13118 480 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 MYLK3Q32MK0 819 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 VWA5B1Q5TIE3 1220 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 C22orf39Q6P5X5 142 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 USP45Q70EL2 814 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 EFL1Q7Z2Z2 1120 aaKnown RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 PAF1Q8N7H5 531 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 IRF7Q92985 503 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 ECHDC3Q96DC8 303 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 TM6SF2Q9BZW4 377 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 P2RY12Q9H244 342 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 GSTO2Q9H4Y5 243 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 PFDN4Q9NQP4 134 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 GTSE1Q9NYZ3 720 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 NOP53Q9NZM5 478 aaKnown RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 KLHL42Q9P2K6 505 aa21.65■■□□□ 1.06
CCM2-206ENST00000474617 EVLQ9UI08 416 aaPredicted RBP21.65■■□□□ 1.06
CCM2-206ENST00000474617 LINC01553A4QN01 128 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 RGSL1A5PLK6 1076 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 E5RI56 91 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 SMAD6O43541 496 aaKnown RBP21.64■■□□□ 1.05
CCM2-206ENST00000474617 POLR2LP62875 67 aaKnown RBP21.64■■□□□ 1.05
CCM2-206ENST00000474617 MAPRE2Q15555 327 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 TEAD2Q15562 447 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 ZNF77Q15935 545 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 LSM12Q3MHD2 195 aaKnown RBP21.64■■□□□ 1.05
CCM2-206ENST00000474617 LYSMD3Q7Z3D4 306 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 CAMK1DQ8IU85 385 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 SCUBE1Q8IWY4 988 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 MAPK15Q8TD08 544 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 MICAL1Q8TDZ2 1067 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 PTERQ96BW5 349 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 ZNF385DQ9H6B1 395 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 GNPTGQ9UJJ9 305 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 INTS6Q9UL03 887 aaKnown RBP21.64■■□□□ 1.05
CCM2-206ENST00000474617 RNF112Q9ULX5 631 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 PLA2G4CQ9UP65 541 aa21.64■■□□□ 1.05
CCM2-206ENST00000474617 TRBV5-4A0A0C4DH59 114 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 E9PBE3 544 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 K7ERQ8 282 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 DCXO43602 365 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 KLK8O60259 260 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 KLHL41O60662 606 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 PABPC1P11940 636 aaKnown RBP21.63■■□□□ 1.05
CCM2-206ENST00000474617 CCR2P41597 374 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 PGGT1BP53609 377 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 PSAPL1Q6NUJ1 521 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 PAQR3Q6TCH7 311 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 TPRG1Q6ZUI0 275 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 TAS2R42Q7RTR8 314 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 PIANPQ8IYJ0 282 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 CLYBLQ8N0X4 340 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 AGAP11Q8TF27 550 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 OR52B2Q96RD2 323 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 NUF2Q9BZD4 464 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 CLPBQ9H078 707 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 DENND2DQ9H6A0 471 aaPredicted RBP21.63■■□□□ 1.05
CCM2-206ENST00000474617 SPHK2Q9NRA0 654 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 SLC8A2Q9UPR5 921 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 MED16Q9Y2X0 877 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 GBF1Q92538 1859 aa21.63■■□□□ 1.05
CCM2-206ENST00000474617 C1orf232A0A0U1RR37 186 aa21.62■■□□□ 1.05
CCM2-206ENST00000474617 WASH3PC4AMC7 463 aa21.62■■□□□ 1.05
CCM2-206ENST00000474617 MOSPD3O75425 235 aa21.62■■□□□ 1.05
CCM2-206ENST00000474617 ZNF821O75541 412 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms