RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 UNKQ9C0B0 810 aaKnown RBP19.72■□□□□ 0.75
SSR1-204ENST00000474597 MRPL46Q9H2W6 279 aaKnown RBP19.72■□□□□ 0.75
SSR1-204ENST00000474597 ASB8Q9H765 288 aa19.72■□□□□ 0.75
SSR1-204ENST00000474597 B4GALT6Q9UBX8 382 aa19.72■□□□□ 0.75
SSR1-204ENST00000474597 G3V2L1 256 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 H2AFYO75367 372 aaKnown RBP19.71■□□□□ 0.75
SSR1-204ENST00000474597 TGDSO95455 350 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 PTPN5P54829 565 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 ITGA9Q13797 1035 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 CTC1Q2NKJ3 1217 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 ZNF805Q5CZA5 627 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 LRRC73Q5JTD7 316 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 LYPLAL1Q5VWZ2 237 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 C6orf89Q6UWU4 347 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 MTSS1LQ765P7 747 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 IGSF5Q9NSI5 407 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 DENND4AQ7Z401 1863 aa19.71■□□□□ 0.75
SSR1-204ENST00000474597 EDDM13A0A1B0GTR0 161 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 PYGLP06737 847 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 CTSLP07711 333 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 RBP1P09455 135 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 CHRM1P11229 460 aaPredicted RBP19.7■□□□□ 0.74
SSR1-204ENST00000474597 PKMP14618 531 aaKnown RBP19.7■□□□□ 0.74
SSR1-204ENST00000474597 OPRD1P41143 372 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 SLC1A6P48664 564 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 OCRLQ01968 901 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 NFATC2Q13469 925 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 ZDHHC20Q5W0Z9 365 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 NUDT18Q6ZVK8 323 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 PPP4R1Q8TF05 950 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 GPR78Q96P69 363 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 SYTL2Q9HCH5 934 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 IL26Q9NPH9 171 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 CRLS1Q9UJA2 301 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 COMMD10Q9Y6G5 202 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 COL4A3Q01955 1670 aa19.7■□□□□ 0.74
SSR1-204ENST00000474597 UPK3BL1B0FP48 263 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 UPK3BL2E5RIL1 263 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 OR1I1O60431 355 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 TRIM13O60858 407 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 SNNO75324 88 aaPredicted RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 VPS26AO75436 327 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ECI2O75521 394 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PRNPP04156 253 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ZNF30P17039 623 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 LHCGRP22888 699 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 EIF2DP41214 584 aaKnown RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 SUOXP51687 545 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PRKAA2P54646 552 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PTSQ03393 145 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ZNF234Q14588 700 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ACAP2Q15057 778 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ITPRIPL2Q3MIP1 535 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 SERPINA13PQ6UXR4 307 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 CCDC121Q6ZUS5 278 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 SERPINA9Q86WD7 417 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 HCAR2Q8TDS4 363 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 OR8D1Q8WZ84 308 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 FAM136AQ96C01 138 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 UBXN10Q96LJ8 280 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 DKK3Q9UBP4 350 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 FAM50BQ9Y247 325 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 MTCH2Q9Y6C9 303 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 USH1CQ9Y6N9 552 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 TSPAN11A1L157 253 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 GOLGA8CPA6NN73 597 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 E5RI56 91 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 GAPDHSO14556 408 aaPredicted RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 GPR39O43194 453 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 HLA-EP13747 358 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ZNF7P17097 686 aaPredicted RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 VIPR1P32241 457 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ADARP55265 1226 aaKnown RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 ASPHQ12797 758 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 HNRNPA1L2Q32P51 320 aaKnown RBP19.69■□□□□ 0.74
SSR1-204ENST00000474597 LIPMQ5VYY2 423 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 CES4AQ5XG92 561 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 TTC7BQ86TV6 843 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PHTF2Q8N3S3 785 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ZNF398Q8TD17 642 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 ANKRD49Q8WVL7 239 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 NECTIN4Q96NY8 510 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 OXSMQ9NWU1 459 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PKD2L2Q9NZM6 624 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 DCTN4Q9UJW0 460 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 PCDHB1Q9Y5F3 818 aa19.69■□□□□ 0.74
SSR1-204ENST00000474597 CCT8L1PA6NM43 557 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 PRMT5O14744 637 aaPredicted RBP19.68■□□□□ 0.74
SSR1-204ENST00000474597 KAT7O95251 611 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 ESR1P03372 595 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 APODP05090 189 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 TIMP2P16035 220 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 ZNF37AP17032 561 aaPredicted RBP19.68■□□□□ 0.74
SSR1-204ENST00000474597 IGFBP4P22692 258 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 CHRNA6Q15825 494 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 POM121L1PQ3SYA9 428 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 GPR33Q49SQ1 333 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 TECRLQ5HYJ1 363 aa19.68■□□□□ 0.74
SSR1-204ENST00000474597 NAIF1Q69YI7 327 aaPredicted RBP19.68■□□□□ 0.74
SSR1-204ENST00000474597 UGT3A1Q6NUS8 523 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms