RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, human

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-215	ENST00000474539	OAZ2	O95190	189 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	KCNK5	O95279	499 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TSPAN8	P19075	237 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SERPINB3	P29508	390 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HNRNPH3	P31942	346 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MC4R	P32245	332 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SSR2	P43308	183 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HADHB	P55084	474 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	WNT3A	P56704	352 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HSD17B7	P56937	341 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SERINC3	Q13530	473 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	AUH	Q13825	339 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	CCIN	Q13939	588 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	DPYSL3	Q14195	570 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	DLG2	Q15700	870 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	FAM98B	Q52LJ0	330 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	PAPD7	Q5XG87	772 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TAPT1	Q6NXT6	567 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MED27	Q6P2C8	311 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MFSD7	Q6UXD7	560 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ANKRD33	Q7Z3H0	272 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HID1	Q8IV36	788 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZNF614	Q8N883	585 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	NIPA2	Q8N8Q9	360 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TRMT2B	Q96GJ1	504 aa	Known RBP	4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	PCED1B	Q96HM7	432 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	FAM161B	Q96MY7	647 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ACOX2	Q99424	681 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	HDHD5	Q9BXW7	423 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	MINDY3	Q9H8M7	445 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	SPHK2	Q9NRA0	654 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	WBP1L	Q9NX94	342 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	TRIM10	Q9UDY6	481 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	ERVK-11	Q9UQG0	969 aa		4.61	□□□□□ -1.67
CCNL1-215	ENST00000474539	DNAJC25-GNG10	A0A024R161	153 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	FAM237B	A0A1B0GVD1	139 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	WDR91	A4D1P6	747 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	C2orf74	A8MZ97	194 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	LEFTY2	O00292	366 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	KERA	O60938	352 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ADRB2	P07550	413 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CSF2RA	P15509	400 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	FOXN2	P32314	431 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	INHBC	P55103	352 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	MAGOH	P61326	146 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	POU6F1	Q14863	301 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	AAGAB	Q6PD74	315 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ATG14	Q6ZNE5	492 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	TPRG1	Q6ZUI0	275 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ERN2	Q76MJ5	926 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CMTM8	Q8IZV2	173 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CACTIN-AS1	Q8N1I8	211 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC39A11	Q8N1S5	342 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CPXM2	Q8N436	756 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	TEX9	Q8N6V9	391 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	C1orf127	Q8N9H9	656 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	USP6NL	Q92738	828 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	KIAA1191	Q96A73	305 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	COL26A1	Q96A83	441 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	TMEM27	Q9HBJ8	222 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	MCCC2	Q9HCC0	563 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	IMP3	Q9NV31	184 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	THAP1	Q9NVV9	213 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	SH3BP4	Q9P0V3	963 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PIGBOS1	A0A0B4J2F0	54 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PRAMEF26	H0Y7S4	382 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PCDH17	O14917	1159 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CAPN5	O15484	640 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	KDELR3	O43731	214 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	SEC22B	O75396	215 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	APOA1	P02647	267 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PCCB	P05166	539 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PABPC4L	P0CB38	370 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC26A3	P40879	764 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	MAGEA10	P43363	369 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ALDH9A1	P49189	494 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	PER3	P56645	1201 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	RAB10	P61026	200 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ALDH6A1	Q02252	535 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	RPL6	Q02878	288 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	INCA1	Q0VD86	236 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	NFYC	Q13952	458 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ACAP2	Q15057	778 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	NR0B2	Q15466	257 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	SLC8B1	Q6J4K2	584 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	P4HA3	Q7Z4N8	544 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	LINC00471	Q8N535	108 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	TC2N	Q8N9U0	490 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	OR10H5	Q8NGA6	315 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	UCN3	Q969E3	161 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	THOC1	Q96FV9	657 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CERS2	Q96G23	380 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	RBM18	Q96H35	190 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	APOPT1	Q96IL0	206 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	ITCH	Q96J02	903 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	CNDP1	Q96KN2	507 aa		4.6	□□□□□ -1.67
CCNL1-215	ENST00000474539	MAGEB18	Q96M61	343 aa		4.6	□□□□□ -1.67

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