RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	DLGAP2	Q9P1A6	1054 aa		3.59	□□□□□ -1.83
TMEM50B-208	ENST00000474272	CNOT8	Q9UFF9	292 aa	Known RBP	3.59	□□□□□ -1.83
TMEM50B-208	ENST00000474272	VPS28	Q9UK41	221 aa		3.59	□□□□□ -1.83
TMEM50B-208	ENST00000474272	IGLV5-37	A0A075B6J1	123 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FAM237A	A0A1B0GTK4	181 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FRMD3	A2A2Y4	597 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	DYTN	A2CJ06	578 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TMEM202	A6NGA9	273 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	HMGB1P1	B2RPK0	211 aa	Predicted RBP	3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	GJB3	O75712	270 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NDUFB4	O95168	129 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FTCD	O95954	541 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	UBA7	P41226	1012 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TAF6	P49848	677 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CLCN3	P51790	818 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NLRP5	P59047	1200 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NIPAL4	Q0D2K0	466 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	DLG1	Q12959	904 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NAE1	Q13564	534 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	USP41	Q3LFD5	358 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CDON	Q4KMG0	1287 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	C6orf141	Q5SZD1	244 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	GKAP1	Q5VSY0	366 aa	Predicted RBP	3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ADAM5	Q6NVV9	412 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	KLHL35	Q6PF15	583 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CCDC129	Q6ZRS4	1044 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SZRD1	Q7Z422	152 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CCDC13	Q8IYE1	715 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	AADAT	Q8N5Z0	425 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	LMNTD1	Q8N9Z9	388 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	IL17RC	Q8NAC3	791 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SCFD2	Q8WU76	684 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SORCS1	Q8WY21	1168 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TRIB2	Q92519	343 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ARHGEF26	Q96DR7	871 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PGLYRP2	Q96PD5	576 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FAM110A	Q9BQ89	295 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FTO	Q9C0B1	505 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PDZD7	Q9H5P4	517 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	MKKS	Q9NPJ1	570 aa	Predicted RBP	3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	RRP7BP	Q9NSQ0	103 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	HAUS2	Q9NVX0	235 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SWAP70	Q9UH65	585 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CEPT1	Q9Y6K0	416 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	STON1	Q9Y6Q2	735 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	RUSC2	Q8N2Y8	1516 aa		3.58	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PTGES3L	E9PB15	166 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	WNT9B	O14905	357 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	VILL	O15195	856 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	AHCYL1	O43865	530 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	HNRNPCL1	O60812	293 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	LDLR	P01130	860 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CFC1B	P0CG36	223 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CFC1	P0CG37	223 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ZNF182	P17025	639 aa	Predicted RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	AMD1	P17707	334 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	EIF2S3	P41091	472 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	GLIPR1	P48060	266 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CLNS1A	P54105	237 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	MC1R	Q01726	317 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CREB5	Q02930	508 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	RBBP5	Q15291	538 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	EFNB3	Q15768	340 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ASTE1	Q2TB18	679 aa	Predicted RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	DUSP28	Q4G0W2	176 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	XKR9	Q5GH70	373 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PLEKHA7	Q6IQ23	1121 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	C16orf54	Q6UWD8	224 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PQLC2	Q6ZP29	291 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SHF	Q7M4L6	423 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	GSTA5	Q7RTV2	222 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	WDR63	Q8IWG1	891 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SCCPDH	Q8NBX0	429 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	AGBL3	Q8NEM8	1001 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TAF15	Q92804	592 aa	Known RBP eCLIP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CD101	Q93033	1021 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NSUN4	Q96CB9	384 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	FAM120B	Q96EK7	910 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SCMH1	Q96GD3	660 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	RSRC1	Q96IZ7	334 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	MYO15B	Q96JP2	1530 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	CMTM3	Q96MX0	182 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ZNF570	Q96NI8	536 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TMEM47	Q9BQJ4	181 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	HAUS8	Q9BT25	410 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	TMX4	Q9H1E5	349 aa	Predicted RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	KCNN2	Q9H2S1	579 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SYNC	Q9H7C4	482 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	KAT14	Q9H8E8	782 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	RANGRF	Q9HD47	186 aa	Predicted RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	NSMCE4A	Q9NXX6	385 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ADD3	Q9UEY8	706 aa	Known RBP	3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ERVK-11	Q9UQG0	969 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	SLC45A1	Q9Y2W3	748 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272	PCDHAC2	Q9Y5I4	1007 aa		3.57	□□□□□ -1.84
TMEM50B-208	ENST00000474272		A0A1B0GVM2	712 aa		3.56	□□□□□ -1.84
TMEM50B-208	ENST00000474272	MAGEA13P	A6NCF6	341 aa		3.56	□□□□□ -1.84
TMEM50B-208	ENST00000474272	ANTXRL	A6NF34	631 aa		3.56	□□□□□ -1.84
TMEM50B-208	ENST00000474272	MYO1G	B0I1T2	1018 aa		3.56	□□□□□ -1.84
TMEM50B-208	ENST00000474272		K7ENM7	598 aa		3.56	□□□□□ -1.84

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