RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ACSM2BQ68CK6 577 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 RGMBQ6NW40 437 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 UNQ6126/PRO20091Q6UXV3 157 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 GLDNQ6ZMI3 551 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SEPT14Q6ZU15 432 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 HIST3H2AQ7L7L0 130 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 CHERPQ8IWX8 916 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 TEX11Q8IYF3 940 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 NAGSQ8N159 534 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SCFD2Q8WU76 684 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SCMH1Q96GD3 660 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM19Q96HH6 336 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 FEM1CQ96JP0 617 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 C3orf30Q96M34 536 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 C1QTNF5Q9BXJ0 243 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 C1QTNF4Q9BXJ3 329 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 TMEM39BQ9GZU3 492 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 USP44Q9H0E7 712 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 GAREM1Q9H706 876 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 UBTD1Q9HAC8 227 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SCPEP1Q9HB40 452 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 RANGRFQ9HD47 186 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 MMP25Q9NPA2 562 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 PCDHB16Q9NRJ7 776 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 C1RLQ9NZP8 487 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 LOXL2Q9Y4K0 774 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 SESN1Q9Y6P5 492 aa3.27□□□□□ -1.89
ECHDC1-213ENST00000474240 IGHV4OR15-8A0A075B7B6 117 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 FAM237BA0A1B0GVD1 139 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 A0A1W2PQF6 199 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 LILRA5A6NI73 299 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 MYO1GB0I1T2 1018 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 GTPBP1O00178 669 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 VCYO14598 125 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 MAP2K7O14733 419 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 CLGNO14967 610 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 BUD23O43709 281 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 CLDN14O95500 239 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ZBTB11O95625 1053 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 EGFP01133 1207 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 G6PDP11413 515 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF23P17027 643 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 TNFAIP3P21580 790 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 SSTR2P30874 369 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 GNL1P36915 607 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 PPARGP37231 505 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 PBX3P40426 434 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 EIF2S3P41091 472 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 UBA7P41226 1012 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 TMPOP42166 694 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 CASP2P42575 452 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 RPL36AP83881 106 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF155Q12901 538 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 DECR1Q16698 335 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 SYT16Q17RD7 645 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 PNLIPRP3Q17RR3 467 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ACCSLQ4AC99 568 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 KCNT1Q5JUK3 1230 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 HAUS3Q68CZ6 603 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 TTI2Q6NXR4 508 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 CYP20A1Q6UW02 462 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ZNF704Q6ZNC4 412 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 GPR180Q86V85 440 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 RNF113BQ8IZP6 322 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 RFLNBQ8N5W9 214 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 C1orf131Q8NDD1 294 aaKnown RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 LNX1Q8TBB1 728 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 SECTM1Q8WVN6 248 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 FIG4Q92562 907 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 CDCA5Q96FF9 252 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 HES6Q96HZ4 224 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 C1orf74Q96LT6 269 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 IL17FQ96PD4 163 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 PDZD7Q9H5P4 517 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 SYNCQ9H7C4 482 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 KAT14Q9H8E8 782 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 SLC28A3Q9HAS3 691 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 ACSS1Q9NUB1 689 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 TXLNGQ9NUQ3 528 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 COPG2Q9UBF2 871 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 STK39Q9UEW8 545 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 TINAGQ9UJW2 476 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 PSAT1Q9Y617 370 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
ECHDC1-213ENST00000474240 A0A1B0GUV1 79 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 A8MZ25 164 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 KCNN4O15554 427 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 USO1O60763 962 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 LDB3O75112 727 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 GPC4O75487 556 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 KDM4BO94953 1096 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PPP1R3DO95685 299 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 RGS2P41220 211 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 COMPP49747 757 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 GEMIN4P57678 1058 aaKnown RBP3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 TAS2R40P59535 323 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PDE1BQ01064 536 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 COASYQ13057 564 aa3.25□□□□□ -1.89
ECHDC1-213ENST00000474240 PDE1CQ14123 709 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms