RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 POLD2P49005 469 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 ILF3Q12906 894 aaKnown RBP eCLIP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 KLF1Q13351 362 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 MARK2Q7KZI7 788 aaKnown RBP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 TMPRSS7Q7RTY8 843 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 TRIM74Q86UV6 250 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 TMPRSS12Q86WS5 348 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 FAM46DQ8NEK8 389 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 IFI44Q8TCB0 444 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 GSDMCQ9BYG8 508 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 FRMD8Q9BZ67 464 aaPredicted RBP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 SUFUQ9UMX1 484 aa14.14□□□□□ -0.15
VAMP4-203ENST00000474047 R3HDM2Q9Y2K5 976 aaKnown RBP14.14□□□□□ -0.15
VAMP4-203ENST00000474047 C5orf60A6NFR6 353 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 AGTP01019 485 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 ACTN2P35609 894 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 CHRNA4P43681 627 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 KCTD16Q68DU8 428 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 EFL1Q7Z2Z2 1120 aaKnown RBP14.13□□□□□ -0.15
VAMP4-203ENST00000474047 SLC13A5Q86YT5 568 aaPredicted RBP14.13□□□□□ -0.15
VAMP4-203ENST00000474047 TMEM121Q9BTD3 319 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 BOCQ9BWV1 1114 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 FRMD8P1Q9BZ68 369 aaPredicted RBP14.13□□□□□ -0.15
VAMP4-203ENST00000474047 CARD9Q9H257 536 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 DPEP2Q9H4A9 486 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 BPIFA1Q9NP55 256 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 ZNHIT2Q9UHR6 403 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 PADI4Q9UM07 663 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 ZNF148Q9UQR1 794 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 PKP3Q9Y446 797 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 SPO11Q9Y5K1 396 aa14.13□□□□□ -0.15
VAMP4-203ENST00000474047 FAM149AA5PLN7 773 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ZSCAN12O43309 604 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SLC25A14O95258 325 aaPredicted RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SOD1P00441 154 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 IVLP07476 585 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 BIRC2Q13490 618 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 PEX6Q13608 980 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SMAD1Q15797 465 aaKnown RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ZNF569Q5MCW4 686 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 HENMT1Q5T8I9 393 aaKnown RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 HES3Q5TGS1 186 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 GLT6D1Q7Z4J2 308 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 GALNT13Q8IUC8 556 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SLC35F3Q8IY50 421 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ARL10Q8N8L6 244 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 GPR26Q8NDV2 337 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 MAPK15Q8TD08 544 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ATG4AQ8WYN0 398 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 NAT6Q93015 286 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 APOL2Q9BQE5 337 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ZSCAN5AQ9BUG6 496 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 TRNAU1APQ9NX07 287 aaKnown RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SLC17A4Q9Y2C5 497 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 FAM221BA6H8Z2 402 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 B4DGG1 531 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 AURKAO14965 403 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ATP1A1P05023 1023 aaKnown RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 GP1BAP07359 652 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 STIP1P31948 543 aaKnown RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 DCDC1P59894 354 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SNX1Q13596 522 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 PARP6Q2NL67 630 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 P3H1Q32P28 736 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 ZDHHC20Q5W0Z9 365 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 GUSBP11Q6P575 273 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 UNQ6494/PRO21346Q6UXR6 183 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 CCNI2Q6ZMN8 369 aaPredicted RBP14.12□□□□□ -0.15
VAMP4-203ENST00000474047 TRAM1L1Q8N609 369 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 SLC35B2Q8TB61 432 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 MAIP1Q8WWC4 291 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 EID2BQ96D98 161 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 OR2M4Q96R27 311 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 WDR24Q96S15 920 aa14.12□□□□□ -0.15
VAMP4-203ENST00000474047 LRP4O75096 1905 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 C2orf81A6NN90 581 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 FADS2P1A8MWK0 482 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 STX7O15400 261 aaKnown RBP14.11□□□□□ -0.15
VAMP4-203ENST00000474047 PSMD3O43242 534 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 CEP104O60308 925 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 IFNB1P01574 187 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 BPIP17213 487 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 HMGCLP35914 325 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 ADCY8P40145 1251 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 CLDN6P56747 220 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 SLC30A9Q6PML9 568 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 TAB3Q8N5C8 712 aaPredicted RBP14.11□□□□□ -0.15
VAMP4-203ENST00000474047 KYQ8NBH2 561 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 CCL4L1Q8NHW4 92 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 GDAP1Q8TB36 358 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 C1orf54Q8WWF1 131 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 COX14Q96I36 57 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 TBL1YQ9BQ87 522 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 SYNDIG1Q9H7V2 258 aa14.11□□□□□ -0.15
VAMP4-203ENST00000474047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.11□□□□□ -0.15
VAMP4-203ENST00000474047 PTPRBP23467 1997 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 LY6G6EA0A0G2JKS1 128 aa14.1□□□□□ -0.15
VAMP4-203ENST00000474047 EME2A4GXA9 379 aaPredicted RBP14.1□□□□□ -0.15
VAMP4-203ENST00000474047 C1QTNF9BB2RNN3 333 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms