RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PP632Q6XCG6 107 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ADGRA1Q86SQ6 560 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 GATAD2AQ86YP4 633 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 FAM186BQ8IYM0 893 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 C1orf87Q8N0U7 546 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 BRI3BPQ8WY22 251 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ABTB1Q969K4 478 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ARRDC3Q96B67 414 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 C18orf12Q96KH6 178 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 TESK2Q96S53 571 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 TRAF4Q9BUZ4 470 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ACAD9Q9H845 621 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 ATP8A2Q9NTI2 1148 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 NDRG3Q9UGV2 375 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 FAM50BQ9Y247 325 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SIPA1L3O60292 1781 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 STRCQ7RTU9 1775 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 TRPM3Q9HCF6 1732 aaPredicted RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 LRRC37A3O60309 1634 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 PHRF1Q9P1Y6 1649 aaKnown RBP1.76□□□□□ -2.13
CCDC39-203ENST00000473854 SLIT1O75093 1534 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 LRRC7Q96NW7 1537 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 AK9Q5TCS8 1911 aa1.76□□□□□ -2.13
CCDC39-203ENST00000473854 MED14O60244 1454 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 NKTRP30414 1462 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 LRPPRCP42704 1394 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 SHANK3Q9BYB0 1731 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ALS2Q96Q42 1657 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CAMTA1Q9Y6Y1 1673 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 PRR32B1ATL7 298 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CCER2I3L3R5 266 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 EBAG9O00559 213 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 PIP5K1BO14986 540 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 DNPH1O43598 174 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 SYNGR3O43761 229 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CIDEAO60543 219 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 TCEA3O75764 348 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 HEXIM1O94992 359 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 PARNO95453 639 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CD48P09326 243 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 TNFSF4P23510 183 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 RRM1P23921 792 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 TTKP33981 857 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 GJC1P36383 396 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 RPE65Q16518 533 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ME3Q16798 604 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 KRT24Q2M2I5 525 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 TUBB8Q3ZCM7 444 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 COBLL1Q53SF7 1204 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 RBMS3Q6XE24 437 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 DPP9Q86TI2 863 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 WDR75Q8IWA0 830 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 FGFRL1Q8N441 504 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ZNF614Q8N883 585 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 OR2L2Q8NH16 312 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 GRHL3Q8TE85 626 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 IPO4Q8TEX9 1081 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 TMEM170AQ8WVE7 144 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 NCSTNQ92542 709 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 PRPF18Q99633 342 aaKnown RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 KATNAL1Q9BW62 490 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CXorf56Q9H5V9 222 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 PRKRIP1Q9H875 184 aaPredicted RBP1.75□□□□□ -2.13
CCDC39-203ENST00000473854 CHST11Q9NPF2 352 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ENTPD7Q9NQZ7 604 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 LZTS1Q9Y250 596 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 DLGAP4Q9Y2H0 992 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ATP7BP35670 1465 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ARHGAP23Q9P227 1491 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ABCA7Q8IZY2 2146 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 KDM3BQ7LBC6 1761 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 KAT6BQ8WYB5 2073 aa1.75□□□□□ -2.13
CCDC39-203ENST00000473854 ADAMTS13Q76LX8 1427 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 YTHDC2Q9H6S0 1430 aaKnown RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 RIMS2Q9UQ26 1411 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 TDRD15B5MCY1 1934 aaKnown RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 ANO9A1A5B4 782 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 ANP32CO43423 234 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 RGS11O94810 467 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 SERPINC1P01008 464 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 CENPBP07199 599 aaPredicted RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 MMP2P08253 660 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 PLA2G4BP0C869 781 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 BMXP51813 675 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 RAD23BP54727 409 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 GTF2H2Q13888 395 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 BTBD16Q32M84 506 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 STXBP5Q5T5C0 1151 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 FAM166AQ6J272 317 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 RGMBQ6NW40 437 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 GTF2H2CQ6P1K8 395 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 GGT6Q6P531 493 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 FMNL3Q8IVF7 1028 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 CHERPQ8IWX8 916 aaKnown RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 SLC39A11Q8N1S5 342 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 PTGR2Q8N8N7 351 aaPredicted RBP1.74□□□□□ -2.13
CCDC39-203ENST00000473854 OR2T6Q8NHC8 308 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 CEP70Q8NHQ1 597 aa1.74□□□□□ -2.13
CCDC39-203ENST00000473854 NEURL2Q9BR09 285 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms