RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 MIPP30301 263 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 STAT5AP42229 794 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 AP1S1P61966 158 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PTSQ03393 145 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 DPTQ07507 201 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 NFATC2Q13469 925 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 SYCP1Q15431 976 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 TSR1Q2NL82 804 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 LACTB2Q53H82 288 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PRR30Q53SZ7 412 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 ZNF648Q5T619 568 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 E4F1Q66K89 784 aaPredicted RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 LRRC66Q68CR7 880 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 CAVIN1Q6NZI2 390 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 TRIM72Q6ZMU5 477 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 APTXQ7Z2E3 356 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PDCD6IPQ8WUM4 868 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 APOBEC4Q8WW27 367 aaKnown RBP9.55□□□□□ -0.88
MCF2L-223ENST00000473345 MGME1Q9BQP7 344 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 TRIM55Q9BYV6 548 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 CLSTN2Q9H4D0 955 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 SP110Q9HB58 689 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 GOLGA6AQ9NYA3 693 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 SEPT3Q9UH03 358 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 KCNK6Q9Y257 313 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PPIL1Q9Y3C6 166 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 SLC30A1Q9Y6M5 507 aa9.55□□□□□ -0.88
MCF2L-223ENST00000473345 PCSK5Q92824 1860 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 CALB1P05937 261 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 COL8A1P27658 744 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 MAP4P27816 1152 aaKnown RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 TEAD1P28347 426 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 ERCC5P28715 1186 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 LEPRP48357 1165 aaKnown RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 ABHD18Q0P651 414 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 CCDC183Q5T5S1 534 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 TMCO4Q5TGY1 634 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 CAPRIN2Q6IMN6 1127 aaKnown RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 IYDQ6PHW0 289 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 WDR74Q6RFH5 385 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 ADAMTSL4Q6UY14 1074 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 CPNE8Q86YQ8 564 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 FAM114A1Q8IWE2 563 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 NCSTNQ92542 709 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 EID2BQ96D98 161 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 SCRN2Q96FV2 425 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 CATSPER2Q96P56 530 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 NUDCD1Q96RS6 583 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 AGPAT1Q99943 283 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 ASPSCR1Q9BZE9 553 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 HSD3B7Q9H2F3 369 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 ARFGAP3Q9NP61 516 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 FBXO8Q9NRD0 319 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 AKAP7Q9P0M2 348 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 PLEKHB1Q9UF11 243 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-223ENST00000473345 TLK1Q9UKI8 766 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 RPS6KL1Q9Y6S9 549 aa9.54□□□□□ -0.88
MCF2L-223ENST00000473345 TMEM191CA6NGB0 347 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 TMCO5BA8MYB1 307 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PDE2AO00408 941 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 KIF1CO43896 1103 aaKnown RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 SOCS5O75159 536 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 LRCH4O75427 683 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PSMA2P25787 234 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 MAPK9P45984 424 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 GPR1P46091 355 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 STC1P52823 247 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 AIF1P55008 147 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 RAB15P59190 212 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PPP1CAP62136 330 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 GPLD1P80108 840 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 HHEXQ03014 270 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 LAMB3Q13751 1172 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ERV3-1Q14264 604 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 RFTN1Q14699 578 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PPP6R3Q5H9R7 873 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ERMARDQ5T6L9 678 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 CPZQ66K79 652 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PLEKHA7Q6IQ23 1121 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ACAD10Q6JQN1 1059 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 IRF2BP2Q7Z5L9 587 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 AP2M1Q96CW1 435 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ELMO2Q96JJ3 720 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 SLC38A3Q99624 504 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 RIOK2Q9BVS4 552 aaKnown RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 BRD8Q9H0E9 1235 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PRDM8Q9NQV8 689 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 SEPT11Q9NVA2 429 aaKnown RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 SLC23A2Q9UGH3 650 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 CROTQ9UKG9 612 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 PHTF1Q9UMS5 762 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ADGRG1Q9Y653 693 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 ICE1Q9Y2F5 2266 aa9.53□□□□□ -0.88
MCF2L-223ENST00000473345 MN1Q10571 1320 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-223ENST00000473345 TNRC6AQ8NDV7 1962 aaKnown RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-223ENST00000473345 PSMD11O00231 422 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 CLDN7O95471 211 aa9.52□□□□□ -0.89
MCF2L-223ENST00000473345 TCN2P20062 427 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms