RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RAD54BQ9Y620 910 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 COPG1Q9Y678 874 aaKnown RBP6.02□□□□□ -1.45
RTF1-203ENST00000473214 CAPN6Q9Y6Q1 641 aa6.02□□□□□ -1.45
RTF1-203ENST00000473214 ANKARQ7Z5J8 1434 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 AKAP12Q02952 1782 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 C15orf38-AP3S2A0A0A6YYH1 394 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 ELOVL7A1L3X0 281 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 GOLGA8OA6NCC3 632 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CFAP73A6NFT4 308 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FAM90A7PA6NKC0 464 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FAM90A22PA8MWA6 464 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FAM90A12PA8MX19 464 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FAM90A23PA8MXZ1 464 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 GOLGA8NF8WBI6 632 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 H3BS24 57 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 ZSCAN9O15535 394 aaPredicted RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 CLDN3O15551 220 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KCNJ13O60928 360 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 AVILO75366 819 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 RHBDL1O75783 438 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CER1O95813 267 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 LMNAP02545 664 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 KRT6BP04259 564 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 AMY1AP04745 511 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KRT8P05787 483 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 ENO1P06733 434 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 C1SP09871 688 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 RALBP11234 206 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KRT3P12035 628 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 AREGP15514 252 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CD6P30203 668 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CRKLP46109 303 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 PTDSS1P48651 473 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 KRT6CP48668 564 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 WNT3AP56704 352 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 MXRA7P84157 204 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 SP2Q02086 613 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 NADK2Q4G0N4 442 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FCRL6Q6DN72 434 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 PMF1Q6P1K2 205 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 PARS2Q7L3T8 475 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 SCYL3Q8IZE3 742 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 MMP21Q8N119 569 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 PQLC1Q8N2U9 271 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CADM4Q8NFZ8 388 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 OR9A1PQ8NGU1 263 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 OR2T34Q8NGX1 318 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 EXOC6Q8TAG9 804 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 GLMPQ8WWB7 406 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 MASTLQ96GX5 879 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 MSANTD3Q96H12 275 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 SECISBP2Q96T21 854 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 SSX3Q99909 188 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 C17orf80Q9BSJ5 609 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 CRNKL1Q9BZJ0 848 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 FAM192AQ9GZU8 254 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 ZNF350Q9GZX5 532 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 RAB17Q9H0T7 212 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 VCX2Q9H322 139 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KCNK13Q9HB14 408 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 WDR6Q9NNW5 1121 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 TLR8Q9NR97 1041 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 TBC1D13Q9NVG8 400 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 ERAP1Q9NZ08 941 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 FTSJ1Q9UET6 329 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 TRMT6Q9UJA5 497 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 DNPEPQ9ULA0 475 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KCNH3Q9ULD8 1083 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 KIAA1257Q9ULG3 409 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 NFU1Q9UMS0 254 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 HPSEQ9Y251 543 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 NUDCQ9Y266 331 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 DRG1Q9Y295 367 aaKnown RBP6.01□□□□□ -1.45
RTF1-203ENST00000473214 EXOC6BQ9Y2D4 811 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 PMF1-BGLAPU3KQ54 211 aa6.01□□□□□ -1.45
RTF1-203ENST00000473214 RPTORQ8N122 1335 aa6□□□□□ -1.45
RTF1-203ENST00000473214 A0A087WZY1 265 aa6□□□□□ -1.45
RTF1-203ENST00000473214 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 FAM230AA0A1W2PPH8 454 aa6□□□□□ -1.45
RTF1-203ENST00000473214 A0A1W2PQM1 296 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SHISA3A0PJX4 238 aa6□□□□□ -1.45
RTF1-203ENST00000473214 TRIM49BA6NDI0 452 aa6□□□□□ -1.45
RTF1-203ENST00000473214 OR2W5A6NFC9 320 aa6□□□□□ -1.45
RTF1-203ENST00000473214 ARHGAP42A6NI28 874 aa6□□□□□ -1.45
RTF1-203ENST00000473214 TEX22C9J3V5 150 aa6□□□□□ -1.45
RTF1-203ENST00000473214 C22orf46C9J442 243 aa6□□□□□ -1.45
RTF1-203ENST00000473214 F8WDY8 70 aa6□□□□□ -1.45
RTF1-203ENST00000473214 CCDC188H7C350 402 aa6□□□□□ -1.45
RTF1-203ENST00000473214 QSOX1O00391 747 aa6□□□□□ -1.45
RTF1-203ENST00000473214 DNALI1O14645 258 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 GRM6O15303 877 aa6□□□□□ -1.45
RTF1-203ENST00000473214 YKT6O15498 198 aa6□□□□□ -1.45
RTF1-203ENST00000473214 FGF10O15520 208 aaPredicted RBP6□□□□□ -1.45
RTF1-203ENST00000473214 GCATO75600 419 aa6□□□□□ -1.45
RTF1-203ENST00000473214 SURF6O75683 361 aaKnown RBP6□□□□□ -1.45
RTF1-203ENST00000473214 CHEK2O96017 543 aa6□□□□□ -1.45
RTF1-203ENST00000473214 OTCP00480 354 aa6□□□□□ -1.45
RTF1-203ENST00000473214 EPB41P11171 864 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms