RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TUBGCP3Q96CW5 907 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 KATNAL1Q9BW62 490 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 MFSD1Q9H3U5 465 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 ACTR3BQ9P1U1 418 aa21.05■□□□□ 0.96
COL18A1-207ENST00000473212 MROH6A6NGR9 719 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 AZIN1O14977 448 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 SLC7A4O43246 635 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 LINC00032P0C843 101 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 MTHFD1P11586 935 aaKnown RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 NFKB2Q00653 900 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 EFEMP1Q12805 493 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 ATP6AP1Q15904 470 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 MS4A13Q5J8X5 152 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 IFNEQ86WN2 208 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 MIB1Q86YT6 1006 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 ZNF683Q8IZ20 524 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 TRPV1Q8NER1 839 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 ARRDC2Q8TBH0 407 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 LRRC58Q96CX6 371 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 CENPNQ96H22 339 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 FEM1CQ96JP0 617 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 B3GALT6Q96L58 329 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 C9orf16Q9BUW7 83 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 SP110Q9HB58 689 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 FOXD2O60548 495 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 PAPSS2O95340 614 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 GOT2P00505 430 aaKnown RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 CYP11A1P05108 521 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 ACVRL1P37023 503 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 CCT8P50990 548 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 BNIP2Q12982 314 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 RPS6KA2Q15349 733 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 CPNE9Q8IYJ1 553 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 OFCC1Q8IZS5 231 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 MYRFLQ96LU7 910 aa21.04■□□□□ 0.96
COL18A1-207ENST00000473212 CHCHD3Q9NX63 227 aaKnown RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 PTBP2Q9UKA9 531 aaKnown RBP21.04■□□□□ 0.96
COL18A1-207ENST00000473212 M0QZQ0 153 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 MTHFD2P13995 350 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 HGFP14210 728 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 HTR7P34969 479 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 THPOP40225 353 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 SLC26A3P40879 764 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 RAP1GAP2Q684P5 730 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 BBS5Q8N3I7 341 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 ITFG2Q969R8 447 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 NPLQ9BXD5 320 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-207ENST00000473212 GID8Q9NWU2 228 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 EI24O14681 340 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 ACOX3O15254 700 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 INPP4BO15327 924 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 FGF4P08620 206 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 RENBPP51606 427 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 TSPY1Q01534 308 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 C16orf72Q14CZ0 275 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 CYP51A1Q16850 503 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 GALNT7Q86SF2 657 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 DNAJB14Q8TBM8 379 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 MIPOL1Q8TD10 442 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 ADAM2Q99965 735 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 PLGRKTQ9HBL7 147 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 GMIPQ9P107 970 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 TIMM22Q9Y584 194 aa21.03■□□□□ 0.96
COL18A1-207ENST00000473212 CCDC162PA2VCL2 907 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 CLOCKO15516 846 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 GFAPP14136 432 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 PMS2P3Q13401 168 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 SCIMPQ6UWF3 145 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 SCML4Q8N228 414 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 ADAMTS16Q8TE57 1224 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.02■□□□□ 0.962e-6■□□□□ 9.6
COL18A1-207ENST00000473212 TEX37Q96LM6 180 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 TRIM62Q9BVG3 475 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 CXorf21Q9HAI6 301 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 PRDM5Q9NQX1 630 aaPredicted RBP21.02■□□□□ 0.96
COL18A1-207ENST00000473212 POLG2Q9UHN1 485 aa21.02■□□□□ 0.96
COL18A1-207ENST00000473212 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.96
COL18A1-207ENST00000473212 ATE1O95260 518 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 RASAL1O95294 804 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 NCK1P16333 377 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 LBPP18428 481 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 FDXRP22570 491 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 PRDX3P30048 256 aaKnown RBP21.02■□□□□ 0.95
COL18A1-207ENST00000473212 DIO3P55073 304 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 RABL3Q5HYI8 236 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 KANK2Q63ZY3 851 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 ELMSAN1Q6PJG2 1045 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 RAB44Q7Z6P3 723 aaPredicted RBP21.02■□□□□ 0.95
COL18A1-207ENST00000473212 ZNF280BQ86YH2 543 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 TRPV3Q8NET8 790 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 ESAMQ96AP7 390 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 FAM210AQ96ND0 272 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 SEMA3CQ99985 751 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 SDR39U1Q9NRG7 319 aaPredicted RBP21.02■□□□□ 0.95
COL18A1-207ENST00000473212 USP22Q9UPT9 525 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 PCDHA9Q9Y5H5 950 aa21.02■□□□□ 0.95
COL18A1-207ENST00000473212 ZFC3H1O60293 1989 aaKnown RBP21.02■□□□□ 0.95
COL18A1-207ENST00000473212 SLC2A3P11169 496 aa21.01■□□□□ 0.95
COL18A1-207ENST00000473212 YWHAHQ04917 246 aaPredicted RBP21.01■□□□□ 0.95
COL18A1-207ENST00000473212 FBXL22Q6P050 247 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms