RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PLXNB3Q9ULL4 1909 aa13.07□□□□□ -0.32
TPM3-216ENST00000473036 ZNF106Q9H2Y7 1883 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 HELZ2Q9BYK8 2649 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 SCAMP1O15126 338 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 BUD23O43709 281 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 MAGEC1O60732 1142 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 PIAS2O75928 621 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ANXA9O76027 345 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 NME1P15531 152 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 BPIP17213 487 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 DGKAP23743 735 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 RPL22P35268 128 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 GRIA1P42261 906 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 CCT8P50990 548 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 GEMP55040 296 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 NFATC4Q14934 902 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ALG11Q2TAA5 492 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 HENMT1Q5T8I9 393 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 MACC1Q6ZN28 852 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ARHGEF18Q6ZSZ5 1173 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 TRIM74Q86UV6 250 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 NLRP8Q86W28 1048 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 PARGQ86W56 976 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 HEATR4Q86WZ0 1026 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 DCP2Q8IU60 420 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ACTRT1Q8TDG2 376 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 OR1E3Q8WZA6 343 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 AP2M1Q96CW1 435 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 PDXPQ96GD0 296 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 CLPBQ9H078 707 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 FGF22Q9HCT0 170 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 BPIFA1Q9NP55 256 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 DNAJC28Q9NX36 388 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 KCTD3Q9Y597 815 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ST14Q9Y5Y6 855 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ARHGEF17Q96PE2 2063 aaPredicted RBP13.06□□□□□ -0.32
TPM3-216ENST00000473036 ACACAQ13085 2346 aa13.06□□□□□ -0.32
TPM3-216ENST00000473036 ASH1LQ9NR48 2969 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 GOLGA6L10A0A0M3HER8 536 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 PDE2AO00408 941 aaPredicted RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 TRIM38O00635 465 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 GAPDHSO14556 408 aaPredicted RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 URI1O94763 535 aaPredicted RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 STK10O94804 968 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 IFNB1P01574 187 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 SLC4A1P02730 911 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 CEACAM5P06731 702 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 HOXC4P09017 264 aaPredicted RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 HLA-DPA1P20036 260 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 STIP1P31948 543 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 POLD2P49005 469 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 KIAA1024LP59773 190 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 CDK3Q00526 305 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 CYP1B1Q16678 543 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 WHAMMP3Q1A5X7 153 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 ENPP7Q6UWV6 458 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 ZNF765Q7L2R6 523 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 NRSN1Q8IZ57 195 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 COX14Q96I36 57 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 CDC6Q99741 560 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 TBL1YQ9BQ87 522 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 FERMT1Q9BQL6 677 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 ARNT2Q9HBZ2 717 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 TOR4AQ9NXH8 423 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 IL17CQ9P0M4 197 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 FEZ2Q9UHY8 353 aaPredicted RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 AAR2Q9Y312 384 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 NEU2Q9Y3R4 380 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 OAS3Q9Y6K5 1087 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 ASXL3Q9C0F0 2248 aa13.05□□□□□ -0.32
TPM3-216ENST00000473036 FLNBO75369 2602 aaKnown RBP13.05□□□□□ -0.32
TPM3-216ENST00000473036 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 TOR1BO14657 336 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 GPR39O43194 453 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 DFNA5O60443 496 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 AP2A1O95782 977 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 FGF1P05230 155 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 MYF5P13349 255 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 TSHRP16473 764 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 JUNDP17535 347 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 TPH1P17752 444 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 NFKBIAP25963 317 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 TEAD1P28347 426 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 THOP1P52888 689 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 C1orf61Q13536 156 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 TCEA2Q15560 299 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 ZNF648Q5T619 568 aaPredicted RBP13.04□□□□□ -0.32
TPM3-216ENST00000473036 RAET1GQ6H3X3 334 aa13.04□□□□□ -0.32
TPM3-216ENST00000473036 ADAMTSL4Q6UY14 1074 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms