RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 AREL1O15033 823 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 HTRA2O43464 458 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 AP1G1O43747 822 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 MAGEC1O60732 1142 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 PIAS2O75928 621 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 MT-CYBP00156 380 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 CPP00450 1065 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 CKMT2P17540 419 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 TCP1P17987 556 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 XPAP23025 273 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 CES1P23141 567 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 AKT2P31751 481 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 GDF10P55107 478 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 RPS21P63220 83 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 CCDC15Q0P6D6 951 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 UBAP2LQ14157 1087 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 FZD2Q14332 565 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 OASLQ15646 514 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 COL28A1Q2UY09 1125 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 PAPD7Q5XG87 772 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 KIAA1161Q6NSJ0 714 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 BRAT1Q6PJG6 821 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 SYT10Q6XYQ8 523 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 PTAR1Q7Z6K3 402 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 Q8N3U1 123 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 FAM71DQ8N9W8 422 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 CCDC110Q8TBZ0 833 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 IMP4Q96G21 291 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 CRELD1Q96HD1 420 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 CAPZA3Q96KX2 299 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 SPATA13Q96N96 652 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 TMEM121Q9BTD3 319 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 TDRD1Q9BXT4 1180 aaKnown RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
SMC4-213ENST00000472282 USP29Q9HBJ7 922 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 RAI2Q9Y5P3 530 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 U3KQA8 63 aa9.15□□□□□ -0.94
SMC4-213ENST00000472282 ZFC3H1O60293 1989 aaKnown RBP9.15□□□□□ -0.95
SMC4-213ENST00000472282 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 A6NNZ2 444 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CES2O00748 559 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CASC3O15234 703 aaKnown RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 MMP20O60882 483 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 ZNF189O75820 626 aaPredicted RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 PGLSO95336 258 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 PDHA1P08559 390 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CA4P22748 312 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 ACP1P24666 158 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 PSMB4P28070 264 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CASQ1P31415 396 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 IGFALSP35858 605 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 SEMG2Q02383 582 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 EIF2B5Q13144 721 aaKnown RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 TARDBPQ13148 414 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMC4-213ENST00000472282 SLC14A2Q15849 920 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CCNG2Q16589 344 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 UGP2Q16851 508 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 ARMC12Q5T9G4 340 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 ITPRIPL1Q6GPH6 555 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 KYAT3Q6YP21 454 aaKnown RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 TTC7BQ86TV6 843 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 TMPRSS12Q86WS5 348 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 RBFAQ8N0V3 343 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 PRELID2Q8N945 189 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 OR4C6Q8NH72 309 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 SPATA22Q8NHS9 363 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 ACTRT1Q8TDG2 376 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 HCAR2Q8TDS4 363 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 HNRNPLLQ8WVV9 542 aaKnown RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 RAB7BQ96AH8 199 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 OXNAD1Q96HP4 312 aaPredicted RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 FEM1CQ96JP0 617 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 APOLD1Q96LR9 279 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 FCRL5Q96RD9 977 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 NAP1L3Q99457 506 aaPredicted RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 AP1M1Q9BXS5 423 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 GBA3Q9H227 469 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 TCEAL2Q9H3H9 227 aaPredicted RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 ETNK1Q9HBU6 452 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 PCDH12Q9NPG4 1184 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 MBNL1Q9NR56 388 aaKnown RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 DNAJC28Q9NX36 388 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 UBP1Q9NZI7 540 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 DKK4Q9UBT3 224 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 TRHDEQ9UKU6 1024 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 TTC7AQ9ULT0 858 aaPredicted RBP9.14□□□□□ -0.95
SMC4-213ENST00000472282 ZNF148Q9UQR1 794 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 CHKBQ9Y259 395 aa9.14□□□□□ -0.95
SMC4-213ENST00000472282 HS3ST3A1Q9Y663 406 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms